Assistant Professor of Computer & Information Science | AI in Life Sciences Researcher | Educator | Writer | Engineer
I am a Computer, Data, and Information Scientist and Educator, serving as an Assistant Professor at Texas Woman's University (TWU) and the Principal Investigator on an active National Science Foundation (NSF) grant. My academic journey spanned 8 years of rigorous training, primarily at the University of Texas at Austin (UT Austin) and the University of Arkansas at Little Rock (UA Little Rock). My timeline, which included a brief leave of absence, reflects a persistent commitment to completing my research goals, culminating in a Ph.D. in Computer and Information Science in 2022. My background is further strengthened by professional research experience at major organizations, including Intel and AbbVie.
My vision is to accelerate scientific discovery in the life sciences by developing human-centered, sustainable, and ethical AI systems. My research group investigates the critical roles of data quality in foundation models and the application of AI in proteomics, drug discovery, and biomedical knowledge extraction. We develop algorithms rooted in both statistical approaches (Bayesian, Markovian) and modern deep learning (Graph Neural Networks).
My teaching philosophy and mission are to mentor students into independent researchers through a guild-based, collaborative, and inclusive approach. I am deeply committed to empowering underrepresented groups in the computational and data sciences.
My work is grounded in core values of service, integrity, and community. Beyond the lab, I am committed to civic and spiritual engagement. I actively serve the scientific community through editorial roles while dedicating time to philanthropic and faith-based organizations.
In addition to my academic responsibilities, I contribute to public discourse on societal issues and provide technical consulting on end-to-end software engineering and data science lifecycle management.
On a personal level, I find joy in hiking, visiting libraries and museums, the ritual of a morning coffee, and building the foundation for my future children.
Core Skills
News
October 2024: Currently teaching Foundations of Data Science and Fundamentals of Informatics.
August 2025: Awarded $210K/$600K NSF Grant (CISE/CCF) as Principal Investigator.
October 2025: Published new paper in Frontiers in Bioinformatics on a novel approach to modeling tokens in protein sequences.
Current Projects
ProtGram-DirectGCN
A novel method for protein-protein interaction prediction using graph convolutional neural networks. This work leverages the primary structure of proteins to infer global dense residue transition graphs, enabling more accurate predictions.
Experience
2023 - Current
Assistant Professor of Computer Science
Texas Woman’s University, Denton, TX
2023
Assistant Professor of Computer Science
Southern Arkansas University, Magnolia, AR
2022 - 2023
Postdoctoral Research Associate
University of North Texas, Denton, TX
2021 - 2022
Research Assistant
University of Arkansas at Little Rock, Little Rock, AR
2019 - 2020
Teaching Assistant
The University of Texas at Austin, Austin, TX
2018 - 2019
Research Assistant
The University of Texas at Austin, Austin, TX
2018
Research Assistant
Texas Advanced Computing Center, The University of Texas at Austin, Austin, TX
2017 - 2018
Research Fellow
The University of Texas at Austin, Austin, TX
2014 - 2017
Research Assistant
University of Arkansas at Little Rock, Little Rock, AR
2011 - 2013
Graduate Assistant
Arkansas Tech University, Russellville, AR
Previous Professional Roles
Software Engineering & Research Internships (2008 - 2020)
AbbVie, Intel, Arkansas.gov, Orange Telecom, Vodafone, Giza Systems
Publications
For a complete list, please visit my profiles on Google Scholar and ResearchGate.
Journal Articles
Inferred global dense residue transition graphs from primary structure sequences enable protein interaction prediction via directed graph convolutional neural networks
Ebeid IA, Tang H, and Gu P (2025). Front. Bioinform. 5:1651623.
View PaperMedGraph: A semantic biomedical information retrieval framework using knowledge graph embedding for PubMed
Ebeid, I. A. (2022). Frontiers in Big Data, 5.
View PaperConference Papers
Adapting a Segmentation Foundation Model for Medical Image Classification
Gu, P., Tang, H., Ebeid, I. A., et al. (2025). IEEE CBMS 2025.
Graph-based hierarchical record clustering for unsupervised entity resolution
Ebeid, I. A., Talburt, J. R., & Siddique, M. A. S. (2022). ITNG 2022.
View PaperGet In Touch
I'm always open to discussing new research, projects, and collaboration opportunities. Feel free to reach out.
C: 512 921 1311 | O: 940 898 2165
Texas Woman’s University | MCL 412 | Denton, TX 76204