Repositories list

• abecto-space-travel-comparison

  Public
  This is a project to compare space travel data from Wikidata and DBpedia using ABECTO.

  Apache License 2.0

  •1•0•0•0•Updated Jan 8, 2026Jan 8, 2026

• abecto-unit-ontology-comparison

  Public
  A comparison and evaluation of unit ontologies using the ABECTO.

  evaluationunits-of-measurecomparison+ 5knowledge-graphontologiesunits-of-measurementaboxunit-ontologies

  Apache License 2.0

  •0•0•0•0•Updated Jan 4, 2026Jan 4, 2026

• abecto

  Public
  An ABox Evaluation and Comparison Tool for Ontologies.

  rdfevaluationowl+ 5comparisonknowledge-graphontologiesowl2abox

  Java

  •

  Apache License 2.0

  •0•4•5•0•Updated Jan 3, 2026Jan 3, 2026

• OAPT

  Public
  This is the description and implementation of the Ontology Analysis and Partitioning Tool (OAPT), which is developed and implemented within the AquaDiva project (http://www.aquadiva.uni-jena.de/)

  Java

  •

  Apache License 2.0

  •1•3•0•2•Updated Dec 30, 2025Dec 30, 2025

• linted-data

  Public
  Java

  •

  Apache License 2.0

  •0•0•0•1•Updated Dec 19, 2025Dec 19, 2025

• Biodiversity-Exploratories-Knowledge-Graph

  Public
  Jupyter Notebook

  •

  MIT License

  •0•0•0•0•Updated Dec 4, 2025Dec 4, 2025

• GerPS-Process

  Public
  Documents (modeling and evaluation) related to the GerPS-onto (An ontology for German public service processes) together with the code for its automatic population with instances

  Creative Commons Attribution 4.0 International

  •1•4•0•0•Updated Nov 26, 2025Nov 26, 2025

• ontology-docs-deployer

  Public
  Python

  •0•0•0•0•Updated Nov 26, 2025Nov 26, 2025

• abecto-ci-demo-example

  Public
  0•0•0•0•Updated Nov 19, 2025Nov 19, 2025

• GerPS-Datafield

  Public
  Repository for the GerPS-DatafieldOntology and its dataset for test purpose.

  Creative Commons Attribution 4.0 International

  •0•0•0•0•Updated Oct 12, 2025Oct 12, 2025

• JaroWinklerSimilarityEvaluation

  Public
  Material for a comparison of Jaro-Winkler similarity computation approaches containing measurement source code, measurement execution scripts, measurement data, analysis scripts, and supplementary tables.

  TeX

  •

  Other

  •0•0•0•1•Updated Jul 12, 2025Jul 12, 2025

• CoMerger

  Public
  Holistic Multiple Ontologies Merge

  Java

  •

  Apache License 2.0

  •0•3•4•2•Updated Jul 12, 2025Jul 12, 2025

• rdf-property-and-datatype-usage-scanner

  Public
  A tool to survey the usage of properties and datatypes in RDF dataset files (as the Web Data Commons) on the web.

  Java

  •

  MIT License

  •0•0•0•1•Updated Jul 12, 2025Jul 12, 2025

• GerPS-Law

  Public
  0•0•0•0•Updated Jul 3, 2025Jul 3, 2025

• ReproduceMeON

  Public
  ReproduceMe Ontology Network (ReproduceMeON)

  experimentmachine-learningontology+ 2ontologynetworkreproduceme

  Jupyter Notebook

  •1•3•0•0•Updated Jun 11, 2025Jun 11, 2025

• information-retrieval-using-multiple-LLM-and-RAG

  Public
  Information Retrieval using Multiple LLMs and RAG

  information-retrievalbiodiversityensemble-classifier+ 2large-language-modelsretrieval-augmented-generation

  TeX

  •

  Apache License 2.0

  •1•4•0•0•Updated May 8, 2025May 8, 2025

• automatic-KG-creation-with-LLM

  Public
  Automatic Ontology and Knowledge Graph construction with LLM

  knowledge-graphreproducibilityontology-engineering+ 1large-language-models

  Python

  •

  Apache License 2.0

  •40•317•1•10•Updated Apr 24, 2025Apr 24, 2025

• GerPS-Software

  Public
  Creative Commons Attribution 4.0 International

  •0•0•0•0•Updated Apr 9, 2025Apr 9, 2025

• PlantHub-QueryBuilder

  Public
  Creative Commons Attribution 4.0 International

  •0•0•0•0•Updated Feb 26, 2025Feb 26, 2025

• INBIO

  Public
  This repository is used to keep track of the development process of INBIO as well as the outcome of the development process

  HTML

  •

  Apache License 2.0

  •0•0•0•0•Updated Feb 13, 2025Feb 13, 2025

• gerps-onto-landingpage

  Public
  Human-readable landingpage for our gerps ontologies.

  CSS

  •0•0•0•0•Updated Jan 21, 2025Jan 21, 2025

• fairjupyter

  Public
  FAIR Jupyter: a knowledge graph for semantic sharing and granular exploration of a computational notebook reproducibility dataset.

  pythonjupyter-notebookontology+ 4pubmed-centralknowledge-graphreproducibilityfair-data

  Jupyter Notebook

  •

  GNU General Public License v3.0

  •0•2•0•0•Updated Jan 10, 2025Jan 10, 2025

• Reproduce-DLmethods-Biodiv

  Public
  This Repo contains the data and codes that were used to extract and analyse the reproducibility information of Deel Learning methods from publications in the Biodiversity domain.

  Python

  •

  Apache License 2.0

  •2•5•0•0•Updated Jan 6, 2025Jan 6, 2025

• MLProvCodeGen

  Public
  Provenance-based Custom Code Generation of Machine Learning Experiments in Jupyter Notebooks

  machine-learningprovenancejinja2-templates+ 1jupyterlab-extension

  Jupyter Notebook

  •

  BSD 3-Clause "New" or "Revised" License

  •0•5•0•20•Updated Dec 10, 2024Dec 10, 2024

• DaiSi

  Public
  [Dai:Si] is a framework for dataset search with a middleware (NodeJS) and a frontend (Angular). Easy to adjust for your own search index.

  demoangularnode+ 2frontenddataset-search

  TypeScript

  •

  GNU Lesser General Public License v3.0

  •3•1•0•36•Updated Dec 5, 2024Dec 5, 2024

• computational-reproducibility-pmc

  Public
  Jupyter Notebook

  •

  GNU General Public License v3.0

  •0•11•0•25•Updated Nov 22, 2024Nov 22, 2024

• iKNOW_poster

  Public
  A Knowledge Graph Management Platform for the Biodiversity Domain

  Ruby

  •

  MIT License

  •1•0•0•2•Updated Oct 28, 2024Oct 28, 2024

• XSearchKG

  Public
  Source code for XSearchKG, a full-stack web application for explainable keyword search over knowledge graphs

  knowledge-graphkeyword-searchexplainability

  JavaScript

  •

  MIT License

  •0•2•0•11•Updated Oct 26, 2024Oct 26, 2024

• abecto-vocabulary

  Public
  The ABECTO Vocabulary (AV) is a vocabulary for the description of execution plans and results of the ABox Evaluation and Comparison Tool for Ontologies (ABECTO).

  qualityrdfevaluation+ 4vocabularyowlontologyowl2

  Shell

  •0•0•0•0•Updated Oct 4, 2024Oct 4, 2024

• semantic-search-usability-analysis

  Public
  Supplementary material for a usability evaluation of a semantic search for biological datasets

  evaluationjupyter-notebookuser-interface+ 6biodiversitysemantic-searchlife-sciencesuser-studyenvironmental-sciencedataset-search

  Jupyter Notebook

  •

  GNU Lesser General Public License v2.1

  •0•2•0•0•Updated Sep 18, 2024Sep 18, 2024