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Commits on Oct 10, 2024

• Add test onnx package

  titaiwangms

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Commits on Oct 8, 2024

• upgrade onnx

  titaiwangms

  committed
  f53902f

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• Revert "upgrade onnx"

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  titaiwangms

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  0b3e63c

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• upgrade onnx

  titaiwangms

  committed
  264ef1b

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Commits on Oct 4, 2024

• Update dependencies (`pandas`, `numpy`, `onnx`) (#1318)

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  joshuacwnewton

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  46248ae

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Commits on Mar 18, 2024

• Update `CHANGES.md` and `version.txt` for ivadomed `2.9.10` release (#1315)

  joshuacwnewton

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  1fccf77

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Commits on Mar 11, 2024

• Test upgrades for pinned dependencies to improve downstream compatibility (#1308)

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  joshuacwnewton

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  kanishk16

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  592485a

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Commits on Jan 30, 2024

• Fix edge case bug where grayscale image has an alpha channel, minor rtd fix (#1313)

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  3 peopleauthored
  881dc68

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Commits on Dec 12, 2023

• Update changelog and version.txt for v2.9.9 (#1307)

  joshuacwnewton

  authored
  4c95d01

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Commits on Dec 11, 2023

• Test out newer versions of PyTorch (`torch>=2.0.0`) for compatibility with downstream projects (SCT, ADS) (#1304)

  joshuacwnewton

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  c52689d

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Commits on Dec 4, 2023

• chore: Dependency Maintenance (imageio 2->3, pyBIDS<0.15.6, readthedocs.yml v2, Python 3.7->3.8) (#1297)

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  4 peopleauthored
  de2bb20

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Commits on Feb 13, 2023

• Update doc for segment_image.py (#1290)

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  jcohenadad

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  e101ebe

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Commits on Jan 31, 2023

• Clarified usage (#1283)

  jcohenadad

  authored
  16f67d4

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Commits on Jan 30, 2023

• Match location of `object_detection` in the template config file and in the documentation (#1278)

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  jcohenadad

  authored
  ea664d5

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Commits on Jan 27, 2023

• Point to the URL specific to the learning rate (#1281)

  jcohenadad

  authored
  f76069e

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Commits on Jan 23, 2023

• Resolve the minor discrepancies between config documentation and actual config fields (#1271)

  konantian

  authored
  fe4b6ad

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Commits on Jan 20, 2023

• `PatchFilter` for 3D subvolume filtering (#1164)

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  4 peopleauthored
  0666ffa

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Commits on Jan 17, 2023

• Do not use wandb if not specified in the config file (#1253)

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  jcohenadad

  and

  kanishk16

  authored
  8b70c30

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Commits on Jan 13, 2023

• Harmonize get_item in MRI2D dataset and MRI3D dataset (#1266)

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  mariehbourget

  authored
  e9739b7

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• Fix NormalizeInstance for uniform samples (#1267)

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  mariehbourget

  authored
  4049e2e

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• Introduce `segment_image` CLI (#1254)

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  jcohenadad

  authored
  fbc97b8

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Commits on Jan 5, 2023

• Clarify usage of --no-patch for 2D only (#1265)

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  mariehbourget

  authored
  ab38140

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Commits on Jan 4, 2023

• Update changelog for v2.9.8 (#1260)

  mariehbourget

  authored
  79493de

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Commits on Jan 3, 2023

• Clarify testing output files (#1244)

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  mariehbourget

  authored
  199eba6

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Commits on Dec 20, 2022

• fix: sync path for wandb logs with path output (#1237)

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  kanishk16

  and

  mariehbourget

  authored
  f066b2e

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• Fix 3D training with data augmentation (#1222)

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  mariehbourget

  authored
  c16c997

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• chore: remove numpy related deprecations (#1246)

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  kanishk16

  authored
  122e4f8

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Commits on Dec 12, 2022

• Move define_device from get_preds to segment_volume (#1209)

  mariehbourget

  authored
  9bb4e7f

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Commits on Nov 28, 2022

• Remove force indexing of microscopy and update ct (#1203)

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  mariehbourget

  authored
  5b2e313

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Commits on Nov 21, 2022

• Add Type Hint for utils.py (#1162)

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  cakester

  and

  dyt811

  authored
  1e8a6bd

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• Add Type Hint for slice_filter.py (#1161)

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  cakester

  and

  dyt811

  authored
  dcda8dd

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• Add type hint for mri3d_subvolume_segmentation_dataset.py (#1157)

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  cakester

  and

  dyt811

  authored
  5845800

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• Add type Hint for mri2d_segmentation_dataset.py (#1156)

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  cakester

  and

  dyt811

  authored
  d43fa5a

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• Add type hinting for bids_dataset.py (#1155)

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  cakester

  and

  dyt811

  authored
  0ef5984

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Commits on Nov 20, 2022

• Add Type Hint for bids3d_dataset (#1153)

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  cakester

  and

  dyt811

  authored
  c61ab28

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