readRABBITMPP
now reads the output files producted by
open source version of RABBIT, available at https://github.com/Biometris/RABBIT. Older files created
using Mathematica are still read as well.plotType = "parCIs"
) is now available for
plotting the parental effects and the confidence intervals around
them.selQTLMPP
now contains the standard
errors of the effects. The standard errors are added in both the full
output (GWAResult) and the table with QTLs (signSnp).gDataMPP
objects is
fixed. Now the correct number of genotypes is shown also when there is
only one cross.parallel = TRUE
in the selQTLMPP
function.createGDataMPP
is added to directly
create a gDataMPP
object from an IBDprob
object (as created by statgenIBD
) and a data.frame with
phenotypic data.readRABBIT
is renamed to readRABBITMPP
to
prevent future conflicts with a similar function in
statgenIBD