nf-core/reportho: nf-core/reportho v1.1.0 – Reliable Rudder

This is the second release of reportho

Added

• added the option to merge identifiers based on sequence
• sequences are now obtained from multiple sources

Removed

• optional MSA and phylogeny generation; a connection to multiplesequencealign will be added in a future version

What's Changed

• Back to dev by @itrujnara in https://github.com/nf-core/reportho/pull/56
• Back to dev again by @itrujnara in https://github.com/nf-core/reportho/pull/59
• Merge template version 3.0.1 by @itrujnara in https://github.com/nf-core/reportho/pull/61
• Merge template version 3.0.2 by @itrujnara in https://github.com/nf-core/reportho/pull/63
• Add subworkflow to get sequences by @itrujnara in https://github.com/nf-core/reportho/pull/67
• Add MERGE_IDS subworkflow by @itrujnara in https://github.com/nf-core/reportho/pull/68
• Adapt scoring subworkflow to work with ID map by @itrujnara in https://github.com/nf-core/reportho/pull/69
• Important! Template update for nf-core/tools v3.1.0 by @nf-core-bot in https://github.com/nf-core/reportho/pull/72
• Make outdir great again by @itrujnara in https://github.com/nf-core/reportho/pull/73
• Add pipeline-level nf-tests and link up merging by @itrujnara in https://github.com/nf-core/reportho/pull/76
• Important! Template update for nf-core/tools v3.2.0 by @nf-core-bot in https://github.com/nf-core/reportho/pull/75
• Update tube map and docs for 1.1.0 by @itrujnara in https://github.com/nf-core/reportho/pull/83
• Improve resource request by @alessiovignoli in https://github.com/nf-core/reportho/pull/84
• Add merge information to MultiQC report by @itrujnara in https://github.com/nf-core/reportho/pull/85
• Pre-release by @itrujnara in https://github.com/nf-core/reportho/pull/88
• Address comments from Austyn's review by @itrujnara in https://github.com/nf-core/reportho/pull/91
• Address Meriam comments by @itrujnara in https://github.com/nf-core/reportho/pull/92
• Important! Template update for nf-core/tools v3.2.1 by @nf-core-bot in https://github.com/nf-core/reportho/pull/93
• Important! Template update for nf-core/tools v3.3.1 by @nf-core-bot in https://github.com/nf-core/reportho/pull/94
• Fix release lints from template 3.3.1 by @itrujnara in https://github.com/nf-core/reportho/pull/95
• Fix CI issues by @itrujnara in https://github.com/nf-core/reportho/pull/96
• Important! Template update for nf-core/tools v3.3.2 by @nf-core-bot in https://github.com/nf-core/reportho/pull/98
• Important! Template update for nf-core/tools v3.4.1 by @nf-core-bot in https://github.com/nf-core/reportho/pull/99
• Release 1.1.0 by @itrujnara in https://github.com/nf-core/reportho/pull/89

New Contributors

• @alessiovignoli made their first contribution in https://github.com/nf-core/reportho/pull/84

Full Changelog: https://github.com/nf-core/reportho/compare/1.0.1...1.1.0