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Commits on Jun 27, 2019

• Update folding parameters

  

  Colton Lloyd

  authored
  81a0332

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Commits on Jun 21, 2019

• correct lon protein

  

  Colton Lloyd

  authored and

  Colton Lloyd

  committed
  022f5d5

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Commits on Oct 31, 2018

• Improve folding

  

  coltonlloyd

  committed
  f70c9a0

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Commits on Oct 27, 2018

• Update folding

  

  coltonlloyd

  committed
  ddd7bc1

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Commits on Oct 26, 2018

• First steps to updating folding

  

  Colton Lloyd

  authored and

  Colton Lloyd

  committed
  dae659b

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Commits on May 22, 2018

• To version 0.0.9

  

  coltonlloyd

  committed
  1d7116b

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Commits on May 19, 2018

• Fix membrane complex stoichiometry bug

  Show description for 977ffea
  

  coltonlloyd

  committed
  977ffea

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Commits on Mar 24, 2018

• To version 0.0.8

  

  coltonlloyd

  committed
  ffef744

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Commits on Mar 17, 2018

• Small model corrections

  Show description for 8b01f0f
  

  coltonlloyd

  committed
  8b01f0f

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Commits on Mar 16, 2018

• Remove mass module from COBRAme

  Show description for 64d91c7
  

  coltonlloyd

  committed
  64d91c7

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Commits on Mar 15, 2018

• Refactor json dumping/loading

  

  coltonlloyd

  committed
  247e348

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Commits on Mar 12, 2018

• Improve metabolite compartments

  

  coltonlloyd

  committed
  662bcba

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Commits on Feb 19, 2018

• Add compartments to json saving

  

  coltonlloyd

  committed
  5edc755

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Commits on Dec 5, 2017

• To version 0.0.7

  

  coltonlloyd

  committed
  ab12aed

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Commits on Dec 1, 2017

• Improve scripts to output model stats

  Show description for b958526
  

  coltonlloyd

  committed
  b958526

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Commits on Oct 31, 2017

• Fix bugs in biomass_allocation

  

  coltonlloyd

  committed
  3bb9e62

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Commits on Oct 19, 2017

• Rename to iJL1678b

  

  coltonlloyd

  committed
  8c111e4

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Commits on Oct 18, 2017

• Clean up biomass constraints

  Show description for 5255a49
  

  coltonlloyd

  committed
  5255a49

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Commits on Oct 16, 2017

• Coupling constraint correction and parameter edits

  Show description for 71c7a9a
  

  coltonlloyd

  committed
  71c7a9a

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• PostTranslationData.translocation now requires set

  Show description for d7536f7
  

  coltonlloyd

  committed
  d7536f7

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• Refactor: condense MEModel dictlists

  Show description for 2837ea1
  

  coltonlloyd

  committed
  2837ea1

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• Rename core modules and improve pep8 compliance

  Show description for 0adc8f0
  

  coltonlloyd

  committed
  0adc8f0

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• Refactor: Remove ModificationData class

  Show description for 0e9f202
  

  coltonlloyd

  committed
  0e9f202

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• Move subreaction attributes from global info

  

  coltonlloyd

  committed
  b60fee2

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• Move translocation_mulipliers to process data

  Show description for 9b7c262
  

  coltonlloyd

  committed
  9b7c262

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• Model building refactoring

  Show description for c340da0
  

  coltonlloyd

  committed
  c340da0

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• Add mass balance tests

  

  coltonlloyd

  committed
  33fe7ae

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• Update benchmark model following bug fix

  Show description for 3e1b643
  

  coltonlloyd

  committed
  3e1b643

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• Travis test against complement Repo/Branch

  

  Colton Lloyd

  authored and

  coltonlloyd

  committed
  2e8cec4

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• Optimize ME-model building

  Show description for 769737d
  

  coltonlloyd

  committed
  769737d

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• Prepare for compatibility w/ new cobrapy versions

  Show description for ee166d4
  

  coltonlloyd

  committed
  ee166d4

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• Specify xlrd package requirement

  

  coltonlloyd

  committed
  71a6e29

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• Make travis_install.sh executable

  

  coltonlloyd

  committed
  8c29c43

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• Mass balance checks and model updates/improvements

  Show description for 1715e36
  

  coltonlloyd

  committed
  1715e36

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• Correct bugs in biomass allocation

  

  coltonlloyd

  committed
  efd27a5

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