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Closes #181
Closes #180
Closes #178
Closes #177
Closes #176
Closes #174

In summary, this PR contains some bug fixes and container updates.

Most notably, the multiqc custom files now all have headers. This should make multiqc less likely to fail.

@erinyoung
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Right now the error is

docker: failed to register layer: write /usr/lib/x86_64-linux-gnu/libgtkd-3.so.0.10.0: no space left on device.

Both workflows that test multiple sequence alignments run out of space when they download the final container for multiqc.

@erinyoung erinyoung merged commit ff093db into main Mar 15, 2024
@erinyoung erinyoung deleted the update-20240306 branch March 19, 2024 16:09
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