BrainNetworksInPython.wrappers package¶

Submodules¶

BrainNetworksInPython.wrappers.corrmat_from_regionalmeasures module¶

BrainNetworksInPython.wrappers.corrmat_from_regionalmeasures.corrmat_from_regionalmeasures(regional_measures_file, names_file, output_name, covars_file=None, names_308_style=False, method='pearson')[source]¶: This is the big function! It reads in the CSV file that contains the regional measures for each participant, the names file and the list of covariates. Then it creates the correlation matrix and writes it out to the output_dir as a txt file.

BrainNetworksInPython.wrappers.corrmat_from_regionalmeasures.setup_argparser()[source]¶: Code to read in arguments from the command line Also allows you to change some settings

BrainNetworksInPython.wrappers.network_analysis_from_corrmat module¶

BrainNetworksInPython.wrappers.network_analysis_perm_ttest module¶

BrainNetworksInPython.wrappers.visualising_network_measures module¶

Module contents¶