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Commits on Dec 18, 2024

• moved manuscript_figures.Rmd to stgeomx_methods

  

  Madison Caldwell

  authored and

  Madison Caldwell

  committed
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Commits on Dec 12, 2024

• most recent updates

  

  Madison Caldwell

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  Madison Caldwell

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Commits on Oct 19, 2024

• gsea updates

  

  Madison Caldwell

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  Madison Caldwell

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Commits on Sep 24, 2024

• move code to replace NA with 0 into the prepare_input function. happens after counts is split into metadata / counts.

  mkiyer

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• resolved conflicts

  

  Madison Caldwell

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  Madison Caldwell

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• added functions for reading DCC and PKC files

  mkiyer

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Commits on Sep 4, 2024

• rebased

  

  Madison Caldwell

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  Madison Caldwell

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Commits on Aug 30, 2024

• minor updates to allow plots to show

  mkiyer

  committed
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• moved highly variable gene functions into stgeomx package

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  mkiyer

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Commits on Aug 28, 2024

• duke ds updates

  

  Madison Caldwell

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  Madison Caldwell

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• vignette ds changes

  

  Madison Caldwell

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  Madison Caldwell

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• Merge branch 'main' of https://github.com/mkiyer/stgeomx

  mkiyer

  committed
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• changes to documentation

  mkiyer

  committed
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• moved merge function

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Commits on Aug 27, 2024

• merging updates

  

  Madison Caldwell

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  Madison Caldwell

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• merged

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  mkiyer

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• updated doc

  mkiyer

  committed
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Commits on Aug 11, 2024

• moved manuscript_figures.rmd location

  

  Madison Caldwell

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  Madison Caldwell

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Commits on Aug 10, 2024

• Package updates

  

  Madison Caldwell

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  Madison Caldwell

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Commits on Mar 8, 2024

• updated spatial organ atlas vignette

  mkiyer

  committed
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Commits on Oct 18, 2023

• overhaul of stgeomx

  mkiyer

  committed
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Commits on Jun 1, 2023

• many updated functions

  mkiyer

  committed
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Commits on May 15, 2023

• revamp project

  mkiyer

  committed
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Commits on May 4, 2023

• get rid of man

  mkiyer

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Commits on Apr 20, 2023

• updates to ipmn vignette

  mkiyer

  committed
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Commits on Apr 16, 2023

• massive changes

  mkiyer

  committed
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Commits on Feb 8, 2023

• new algorithms for bg correction

  mkiyer

  committed
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Commits on Jan 31, 2023

• new methods

  mkiyer

  committed
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Commits on Dec 2, 2022

• st ipmn vignette updates

  mkiyer

  committed
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• new bg correct

  mkiyer

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Commits on Nov 30, 2022

• new cluster noise function

  mkiyer

  committed
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Commits on Nov 21, 2022

• going to delete kde bg correction

  mkiyer

  committed
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Commits on Nov 14, 2022

• added vignette for st ipmn wta run

  mkiyer

  committed
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• delete man files

  mkiyer

  committed
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• updated vignette code

  mkiyer

  committed
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