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Commits on Jul 10, 2023

• Update README.md

  mikolmogorov

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  c86d096

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Commits on Apr 22, 2023

• Update README.md

  mikolmogorov

  authored
  28cb013

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Commits on Feb 17, 2023

• 0.12

  mikolmogorov

  committed
  435929e

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• Flye update

  mikolmogorov

  committed
  fdcd9fb

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Commits on Feb 6, 2023

• Update README.md

  mikolmogorov

  authored
  87d953e

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Commits on Dec 12, 2022

• version update

  mikolmogorov

  committed
  ce53c64

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• fixing very short reads

  mikolmogorov

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  325e7a6

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• fix #23

  mikolmogorov

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  c0037e7

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Commits on Dec 4, 2022

• Update README.md

  mikolmogorov

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  6e155e9

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Commits on Nov 22, 2022

• fixing overwrite behavior

  mikolmogorov

  committed
  b0fd212

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Commits on Oct 29, 2022

• flye update + 0.10

  mikolmogorov

  committed
  ae546ca

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Commits on Oct 24, 2022

• Update README.md

  mikolmogorov

  authored
  96c7e31

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Commits on Aug 5, 2022

• cigar parsing fix

  mikolmogorov

  committed
  64c5e71

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Commits on Jul 22, 2022

• option to use unphased reads for polishing, dont use unphased by default

  mikolmogorov

  committed
  9227b4c

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• flye commit update

  mikolmogorov

  committed
  cbb295b

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Commits on Jun 24, 2022

• new Margin + 0.8

  mikolmogorov

  committed
  1ab42a4

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Commits on May 8, 2022

• manual update

  mikolmogorov

  committed
  625aa23

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• new output type: phased assembly

  mikolmogorov

  committed
  2427417

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Commits on Mar 24, 2022

• -I 64 for minimap

  mikolmogorov

  committed
  c83974d

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Commits on Mar 4, 2022

• 0.6

  mikolmogorov

  committed
  8d29362

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• better parallel liftover

  mikolmogorov

  committed
  0909330

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Commits on Mar 2, 2022

• parallel liftover 2

  mikolmogorov

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  df1ee97

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• parallel liftover

  mikolmogorov

  committed
  97372a2

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Commits on Feb 16, 2022

• no quantized optin for pepper

  mikolmogorov

  committed
  06b0411

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• pepper_model argument

  mikolmogorov

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  0972bd0

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Commits on Feb 6, 2022

• 0.5

  mikolmogorov

  committed
  7746869

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Commits on Feb 4, 2022

• pepper 0.7

  mikolmogorov

  committed
  0bfe20b

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Commits on Dec 23, 2021

• --bam-index option for custom index location

  mikolmogorov

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  6a8aa32

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Commits on Nov 19, 2021

• 0.4

  mikolmogorov

  committed
  f863195

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• --version

  mikolmogorov

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Commits on Nov 18, 2021

• margin config for hifi

  mikolmogorov

  committed
  5714895

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• logging instead of print

  mikolmogorov

  committed
  fe51562

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• Merge branch 'main' of https://github.com/fenderglass/Hapdup into main

  mikolmogorov

  committed
  3b88377

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• adding hifi support

  mikolmogorov

  committed
  b104d6b

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• Update README.md

  mikolmogorov

  authored
  92a1eb0

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