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Commits on Oct 15, 2014

• Talk for Boston area bioinformatics interest group (BIG) meeting

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Commits on Oct 12, 2014

• Add license information to bcbio-gff

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Commits on Oct 7, 2014

• Additional revisions of joint calling post based on Oliver's feedback. Finalize and post

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Commits on Sep 26, 2014

• Initial rough draft of post of validation of joint calling in bcbio

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Commits on Sep 12, 2014

• Updates to UGa talk after practice

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Commits on Sep 11, 2014

• Talk for UGa Bioinformatics institute

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Commits on Aug 12, 2014

• Final version of structural variant calling writeup

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Commits on Aug 7, 2014

• Presentation for Intel Life Sciences tutorial

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Commits on Aug 3, 2014

• Initial work on validated structural variant calling blog post

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Commits on Jul 16, 2014

• bcbio-gff: version 0.5 with test for whitespace issues. Fixes #88

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Commits on Jul 12, 2014

• BOSC 2014 bcbio talk slides

  chapmanb

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• BOSC day 1 talk notes

  chapmanb

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Commits on Jul 1, 2014

• Finalized talk for Galaxy Community Conference on bcbio/Galaxy

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Commits on Jun 27, 2014

• Initial incomplete draft of GCC bcbio slides

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Commits on Jun 26, 2014

• Initial version of Galaxy Community conference CloudBioLinux session

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Commits on Jun 25, 2014

• Initial slides for GCC training day on CloudBioLinux

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Commits on Jun 21, 2014

• Poster from Luca on bcbio-nextgen for cancer calling

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Commits on Jun 3, 2014

• bcbio-nextgen talk for Biogen hackathon

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Commits on May 10, 2014

• Finalize LCR, high depth and VQSR evaluation post with improved figures and text based on suggestions

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Commits on Apr 28, 2014

• Initial writeup on WGS variant calling improvements

  chapmanb

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Commits on Apr 24, 2014

• Depth, quality, allele ratio plots for assessing cutoffs for high-depth based filtering of false positives

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Commits on Apr 17, 2014

• Slides for ABCD talk

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Commits on Mar 12, 2014

• Handle unescaped semi-colons within quotes and add test case. #83

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• Merge pull request #83 from Hugh-Zhu/patch-1

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Commits on Mar 10, 2014

• BUG report

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Commits on Mar 6, 2014

• Post on bcbio-nextgen-vm: docker + bcbio-nextgen

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Commits on Jan 31, 2014

• DebianMed talk

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Commits on Jan 21, 2014

• Slides for novartis talk

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Commits on Jan 2, 2014

• bcbio-gff v0.4

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Commits on Dec 11, 2013

• Notes from Mt Sinai genome scaling workshop

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Commits on Dec 10, 2013

• Update chapman_bcbio.tex

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• Flyer for workshop

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• Finalize presentation for Mt Sinai on scaling

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Commits on Dec 9, 2013

• Remove num_alignments, since it's incompatible (and redundant) with max_target_sets for outfmt > 4. Thanks to Joshua Elkington

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• Presentation for Mt Sinai workshop

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