Hello,
recently I tried to add some clinical CTs from hosipitals into KiTS. However I noticed KiTS nii fomat shape be like (num_slices, height, width) , which can be described as (z, x ,y) and origin be like(0,0,0). But my CTs get (x, y ,z) shape and have none-zero origins. One way to solve this problem is that I transposed the dims, pixdims. But how to deal with the qform/sform , origin and srow_x/y/z in the metadata still confuse me.