Unicycler version issue #51
Description
Hi,
Thank you for this great workflow!
I encounter the following error from unicycler running hybrid mode:
Dependencies:
Program Version Status
spades.py 3.13.0 good
racon - good
makeblastdb 2.5.0+ good
tblastn 2.5.0+ good
bowtie2-build 2.4.1 good
bowtie2 2.4.1 good
samtools ? too old
java 11.0.8-internal good
pilon 1.23 good
bcftools not used
Error: Unspecified error with Unicycler dependenciesI think this is probably related to this issue.
It seems changing to another image fixes the issue. I used quay.io/biocontainers/unicycler:0.4.8--py37h13b99d1_3.
Software versions:
- nextflow: 21.04.1.5556
- bacass: nfcore/bacass:1.1.1
- runtime: docker
- platform: google cloud instance with Ubuntu 20.04.2 LTS
Chenhao