Description of the bug

The current module doesn't actually take the fastq files as a staged input, only constructs links to them, which means that it doesn't work on AWS for example as the files aren't staged correctly.
The version in the modules repository has been updated to take the paths to stage them properly.

Command used and terminal output

nextflow run nf-core/demultiplex -r dev -profile test_fqtk,docker --outdir out

Relevant files

No response

System information

No response