From 35e2471a4937b67480c3e7c6a14d7c8f51532b1f Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Alan=20M=C3=B6bbs?= Date: Mon, 4 Nov 2024 14:25:49 +0000 Subject: [PATCH] set reports and stats outputs to optional --- modules/nf-core/cellranger/mkfastq/main.nf | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/modules/nf-core/cellranger/mkfastq/main.nf b/modules/nf-core/cellranger/mkfastq/main.nf index 09480345aac1..89a1a8242928 100644 --- a/modules/nf-core/cellranger/mkfastq/main.nf +++ b/modules/nf-core/cellranger/mkfastq/main.nf @@ -10,8 +10,8 @@ process CELLRANGER_MKFASTQ { output: tuple val(meta), path("*_outs/outs/fastq_path/**/*.fastq.gz") , emit: fastq tuple val(meta), path("*_outs/outs/fastq_path/Undetermined*.fastq.gz") , optional:true, emit: undetermined_fastq - tuple val(meta), path("*_outs/outs/fastq_path/Reports") , emit: reports - tuple val(meta), path("*_outs/outs/fastq_path/Stats") , emit: stats + tuple val(meta), path("*_outs/outs/fastq_path/Reports") , optional:true, emit: reports + tuple val(meta), path("*_outs/outs/fastq_path/Stats") , optional:true, emit: stats tuple val(meta), path("*_outs/outs/interop_path/*.bin") , emit: interop path "versions.yml" , emit: versions