diff --git a/docs/images/reportho_tube_map.svg b/docs/images/reportho_tube_map.svg index dc5d338..e105a61 100644 --- a/docs/images/reportho_tube_map.svg +++ b/docs/images/reportho_tube_map.svg @@ -1,4 +1,4 @@ -Filter hitsnf-core/reporthoFastaSequence queryIDUniprot ID queryIdentify sequenceOMAIdentify taxonOMAOMAPANTHEROrthoInspectorEggNOGOnlineLocalOnlineLocalOnlineLocalcsvcsvcsvcsvSingle predictionsQuery informationtxtMake score tablecsvmergePythonFetch ortholog predictions csvScore tablePythonPlot orthologsggplot listFiltered orthologsComparison plotsFastqFastqpngFetch sequencesOMA/UniprotFetch structuresAlphaFoldDB3D-COFFEE fastaOrtholog sequencesT-COFFEE alnMSAIQ-TREEFastME nwkTreePythonOrtholog statisticsCalculate statisticsDump parameterscatGenerate reportsReact listVersion 1.0.0Magnificent MainsailCore subworkflowOptional downstream analysisOptional report generationCore data flowReport data flow htmlPer-query reportsChoose oneCreate alignmentMake phylogenySubworkflow htmlSummary reportGenerate summaryMultiQC +Filter hitsFilter hitsnf-core/nf-core/reporthoreporthoFastaFastaSequence querySequence q...IDIDUniprot ID queryUniprot ID queryIdentify sequenceIdentify s...OMAOMAIdentify taxonIdentify t...OMAOMAOMAOMAPANTHERPANTHEROrthoInspectorOrthoInspe...EggNOGEggNOGOnlineOnlineLocalLocalOnlineOnlineLocalLocalOnlineOnlineLocalLocalcsvcsvcsvcsvcsvcsvcsvcsvSingle predictionsSingle predi...Query informationQuery inform...txttxtMake score tableMake score ta...csvmergePythoncsvmerge...Fetch ortholog predictionsFetch ortholog predictions csvcsvScore tableScore tablePythonPythonPlot orthologsPlot orthologsggplotggplot listlistFiltered orthologsFiltered ort...Comparison plotsComparison pl...FastqFastqFastqFastqpngpngFetch sequencesFetch sequenc...OMA/UniprotOMA/UniprotFetch structuresFetch structu...AlphaFoldDBAlphaFoldDB3D-COFFEE3D-COFFEE fastafastaOrtholog sequencesOrtholog se...T-COFFEET-COFFEE alnalnMSAMSAIQ-TREEIQ-TREEFastMEFastME nwknwkTreeTreePythonPythonOrtholog statisticsOrtholog sta...Calculate statisticsCalculate sta...Dump parametersDump paramete...catcatGenerate reportsGenerate repo...ReactReact listlistVersion 1.0.0Magnificent MainsailVersion 1.0.0...Core subworkflowCore subworkflowOptional downstream analysisOptional downstream analysisOptional report generationOptional report generationCore data flowCore data flowReport data flowReport data flow htmlhtmlPer-query reportsPer-query repor...Choose oneChoose oneCreate alignmentCreate alignmentMake phylogenyMake phylogenySubworkflowSubworkflow htmlhtmlSummary reportSummary re...Generate summaryGenerate summ...MultiQCMultiQC