From f3195edeb7d0af3445fad353c4d4fb8628e1e040 Mon Sep 17 00:00:00 2001
From: mirpedrol <mirp.julia@gmail.com>
Date: Thu, 8 Dec 2022 13:14:39 +0100
Subject: [PATCH 1/3] fix new syntax form set_output in sync.yml

---
 .github/workflows/sync.yml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/.github/workflows/sync.yml b/.github/workflows/sync.yml
index b72e8ada6f..7844999dcd 100644
--- a/.github/workflows/sync.yml
+++ b/.github/workflows/sync.yml
@@ -27,7 +27,7 @@ jobs:
           else
             curl -O https://nf-co.re/pipeline_names.json
           fi
-          echo "name=matrix::$(cat pipeline_names.json)" >> $GITHUB_OUTPUT
+          echo "matrix==$(cat pipeline_names.json)" >> $GITHUB_OUTPUT
 
   sync:
     needs: get-pipelines

From ebd0b2dbab2036ca563cb1aceb3c977254855010 Mon Sep 17 00:00:00 2001
From: mirpedrol <mirp.julia@gmail.com>
Date: Thu, 8 Dec 2022 13:23:18 +0100
Subject: [PATCH 2/3] bump to version 2.7.1

---
 CHANGELOG.md | 4 ++++
 setup.py     | 2 +-
 2 files changed, 5 insertions(+), 1 deletion(-)

diff --git a/CHANGELOG.md b/CHANGELOG.md
index 736e9600b2..a96b0db398 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -1,5 +1,9 @@
 # nf-core/tools: Changelog
 
+## [v2.7.1 - Mercury Eagle Patch](https://github.com/nf-core/tools/releases/tag/2.7.1) - [2022-12-08]
+
+- Patch release to fix pipeline sync ([#2110](https://github.com/nf-core/tools/pull/2110))
+
 ## [v2.7 - Mercury Eagle](https://github.com/nf-core/tools/releases/tag/2.7) - [2022-12-07]
 
 Another big release with lots of new features and bug fixes. Thanks to all contributors!
diff --git a/setup.py b/setup.py
index c2559d1776..046f5ddf76 100644
--- a/setup.py
+++ b/setup.py
@@ -2,7 +2,7 @@
 
 from setuptools import find_packages, setup
 
-version = "2.7"
+version = "2.7.1"
 
 with open("README.md") as f:
     readme = f.read()

From 8c0c71885709845aaefb899c277ac0726a27a1dc Mon Sep 17 00:00:00 2001
From: mirpedrol <mirp.julia@gmail.com>
Date: Thu, 8 Dec 2022 13:30:30 +0100
Subject: [PATCH 3/3] fix typo

---
 .github/workflows/sync.yml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/.github/workflows/sync.yml b/.github/workflows/sync.yml
index 7844999dcd..f3dec0e086 100644
--- a/.github/workflows/sync.yml
+++ b/.github/workflows/sync.yml
@@ -27,7 +27,7 @@ jobs:
           else
             curl -O https://nf-co.re/pipeline_names.json
           fi
-          echo "matrix==$(cat pipeline_names.json)" >> $GITHUB_OUTPUT
+          echo "matrix=$(cat pipeline_names.json)" >> $GITHUB_OUTPUT
 
   sync:
     needs: get-pipelines