diff --git a/CHANGELOG.md b/CHANGELOG.md
index c9633bd0db..84ba83f17c 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -8,6 +8,7 @@
 - update multiqc version to fix utils test ([#3853](https://github.com/nf-core/tools/pull/3853))
 - Update dependency textual-dev to v1.8.0 ([#3860](https://github.com/nf-core/tools/pull/3860))
 - Update pre-commit hook astral-sh/ruff-pre-commit to v0.14.3 ([#3861](https://github.com/nf-core/tools/pull/3861))
+- Make bump-version snapshot test more stable ([#3865](https://github.com/nf-core/tools/pull/3865))
 
 ### Template
 
diff --git a/tests/pipelines/test_bump_version.py b/tests/pipelines/test_bump_version.py
index 8cee7dc095..ec5021f663 100644
--- a/tests/pipelines/test_bump_version.py
+++ b/tests/pipelines/test_bump_version.py
@@ -80,16 +80,18 @@ def test_bump_pipeline_version_in_snapshot(self):
         snapshot_dir.mkdir(parents=True, exist_ok=True)
         snapshot_fn = snapshot_dir / "main.nf.test.snap"
         snapshot_fn.touch()
+
+        pipeline_slug = f"{self.pipeline_obj.pipeline_prefix}/{self.pipeline_obj.pipeline_name}"
         # write version number in snapshot
         with open(snapshot_fn, "w") as fh:
-            fh.write("nf-core/testpipeline=1.0.0dev")
+            fh.write(f"{pipeline_slug}=1.0.0dev")
 
         # Bump the version number
         nf_core.pipelines.bump_version.bump_pipeline_version(self.pipeline_obj, "1.1.0")
 
         # Check the snapshot
         with open(snapshot_fn) as fh:
-            assert fh.read().strip() == "nf-core/testpipeline=1.1.0"
+            assert fh.read().strip() == f"{pipeline_slug}=1.1.0"
 
     def test_bump_pipeline_version_in_snapshot_no_version(self):
         """Test that bump version does not update versions in the snapshot if no version is given."""
diff --git a/tests/pipelines/test_params_file.py b/tests/pipelines/test_params_file.py
index 723a8a561e..a62b90f4ed 100644
--- a/tests/pipelines/test_params_file.py
+++ b/tests/pipelines/test_params_file.py
@@ -25,7 +25,7 @@ def test_build_template(self):
         with open(self.outfile) as fh:
             out = fh.read()
 
-        assert "nf-core/testpipeline" in out
+        assert f"{self.pipeline_obj.pipeline_prefix}/{self.pipeline_obj.pipeline_name}" in out
 
     def test_build_template_invalid_schema(self):
         """Build a schema from a template"""
@@ -63,5 +63,5 @@ def test_build_template_content(self):
         with open(self.outfile) as fh:
             out = fh.read()
 
-        assert "nf-core/testpipeline" in out
+        assert f"{self.pipeline_obj.pipeline_prefix}/{self.pipeline_obj.pipeline_name}" in out
         assert "# input: null" in out
diff --git a/tests/pipelines/test_rocrate.py b/tests/pipelines/test_rocrate.py
index ac86e64bdf..a073beae31 100644
--- a/tests/pipelines/test_rocrate.py
+++ b/tests/pipelines/test_rocrate.py
@@ -55,7 +55,9 @@ def test_rocrate_creation(self):
         for entity in entities:
             entity_json = entity.as_jsonld()
             if entity_json["@id"] == "./":
-                self.assertEqual(entity_json.get("name"), "nf-core/testpipeline")
+                self.assertEqual(
+                    entity_json.get("name"), f"{self.pipeline_obj.pipeline_prefix}/{self.pipeline_obj.pipeline_name}"
+                )
                 self.assertEqual(entity_json["mainEntity"], {"@id": "main.nf"})
             elif entity_json["@id"] == "#main.nf":
                 self.assertEqual(entity_json["programmingLanguage"], [{"@id": "#nextflow"}])