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@bioinf-jku Institute of Bioinformatics, Johannes Kepler University Linz

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    29 repositories

    • TTUR

      Public
      Two time-scale update rule for training GANs
      Jupyter Notebook
      •
      Apache License 2.0
      •172•895•18•0•Updated Dec 14, 2025Dec 14, 2025

    • SNNs

      Public
      Tutorials and implementations for "Self-normalizing networks"
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •196•1.6k•1•1•Updated Dec 9, 2025Dec 9, 2025

    • apcluster

      Public
      R package implementing affinity propagation clustering along with various utilities
      R
      •10•0•0•0•Updated May 17, 2024May 17, 2024

    • procoil

      Public
      R package for predicting the oligomerization of coiled coil proteins
      R
      •2•0•0•0•Updated May 17, 2024May 17, 2024

    • podkat

      Public
      R package for position-dependent kernel association test
      R
      •3•0•0•0•Updated May 17, 2024May 17, 2024

    • rococo

      Public
      R package implementing the robust rank correlation coefficient and test
      R
      •3•0•0•0•Updated May 17, 2024May 17, 2024

    • msa

      Public
      R package for multiple sequence alignment
      C
      •13•0•0•0•Updated May 17, 2024May 17, 2024

    • kebabs

      Public
      C++
      •3•0•0•0•Updated May 17, 2024May 17, 2024

    • FCD

      Public
      Fréchet ChemNet Distance: A quality measure for generative models for molecules
      Python
      •
      GNU Lesser General Public License v3.0
      •27•89•0•1•Updated Apr 1, 2024Apr 1, 2024

    • panelcn.mops

      Public
      CNV detection tool for targeted NGS panel data
      R
      •9•16•4•0•Updated Feb 28, 2022Feb 28, 2022

    • pyfabia

      Public
      Fabia Biclustering Algorithm in Cython
      Python
      •
      Other
      •12•7•1•1•Updated Jan 16, 2022Jan 16, 2022

    • coulomb_gan

      Public
      Implementation of Coulomb GANs
      Python
      •12•63•0•0•Updated Aug 22, 2021Aug 22, 2021

    • librfn-python

      Public
      Python wrapper for the RFN library.
      Python
      •
      Other
      •4•3•0•0•Updated Oct 20, 2019Oct 20, 2019

    • librfn

      Public
      Rectified Factor Networks
      C++
      •
      Other
      •15•37•1•0•Updated Oct 16, 2019Oct 16, 2019

    • interpretable_ml_drug_discovery

      Public
      Interpreting graph convolutional filters of target prediction network
      Jupyter Notebook
      •16•48•2•0•Updated Mar 8, 2019Mar 8, 2019

    • baselines-rudder

      Public
      RUDDER for ATARI games with delayed rewards in OpenAI Baselines package
      Python
      •
      MIT License
      •5k•1•0•0•Updated Jun 15, 2018Jun 15, 2018

    • tensorflow-layer-library

      Public
      Tensorflow Layer Library (TeLL)
      Python
      •
      Other
      •9•5•0•0•Updated Jun 14, 2018Jun 14, 2018

    • librfn-R

      Public
      R
      •
      GNU General Public License v2.0
      •2•1•0•0•Updated May 19, 2018May 19, 2018

    • binet

      Public
      Deep Learning package for Python
      Python
      •
      Other
      •14•25•3•1•Updated Apr 5, 2018Apr 5, 2018

    • DeepSynergy

      Public
      Jupyter Notebook
      •29•0•0•0•Updated Dec 15, 2017Dec 15, 2017

    • platt

      Public
      Platt scaling
      R
      •
      GNU General Public License v3.0
      •1•0•0•0•Updated Jan 13, 2017Jan 13, 2017

    • project_BBDD

      Public
      Other
      •1•5•0•0•Updated Jan 3, 2017Jan 3, 2017

    • dexus

      Public
      This is a read-only mirror of the Bioconductor SVN repository. Package Homepage: http://bioconductor.org/packages/devel/bioc/html/dexus.html Bug Reports: https:…
      R
      •2•0•0•0•Updated Aug 22, 2016Aug 22, 2016

    • farms

      Public
      This is a read-only mirror of the Bioconductor SVN repository. Package Homepage: http://bioconductor.org/packages/devel/bioc/html/farms.html Contributions: http…
      R
      •1•0•0•0•Updated May 6, 2016May 6, 2016

    • cn.farms

      Public
      This is a read-only mirror of the Bioconductor SVN repository. Package Homepage: http://bioconductor.org/packages/devel/bioc/html/cn.farms.html Contributions: h…
      R
      •1•0•0•0•Updated May 6, 2016May 6, 2016

    • Rchemcpp

      Public
      This is a read-only mirror of the Bioconductor SVN repository. Package Homepage: http://bioconductor.org/packages/devel/bioc/html/Rchemcpp.html Contributions: h…
      C++
      •2•0•0•0•Updated May 5, 2016May 5, 2016

    • fastseg

      Public
      This is a read-only mirror of the Bioconductor SVN repository. Package Homepage: http://bioconductor.org/packages/devel/bioc/html/fastseg.html Contributions: ht…
      R
      •0•0•0•0•Updated May 5, 2016May 5, 2016

    • cn.mops

      Public
      This is a read-only mirror of the Bioconductor SVN repository. Package Homepage: http://bioconductor.org/packages/devel/bioc/html/cn.mops.html Contributions: ht…
      R
      •4•0•0•0•Updated May 5, 2016May 5, 2016

    • libfabia

      Public
      High-Performance implementation of FABIA biclustering
      C
      •
      Other
      •3•1•0•0•Updated Oct 13, 2015Oct 13, 2015