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Problem running package with python 3.13 #337

@AmrSaber

Description

@AmrSaber

Hello,

I could not run the package using Python 3.13 as I get the following error message on pip install fmeval

Collecting markdown (from fmeval)
  Using cached Markdown-3.7-py3-none-any.whl.metadata (7.0 kB)
Collecting matplotlib<4.0.0,>=3.8.3 (from fmeval)
  Using cached matplotlib-3.10.0-cp313-cp313-macosx_11_0_arm64.whl.metadata (11 kB)
Collecting mypy-boto3-bedrock<2.0.0,>=1.33.2 (from fmeval)
  Using cached mypy_boto3_bedrock-1.35.75-py3-none-any.whl.metadata (15 kB)
Collecting nltk<4.0.0,>=3.9.0 (from fmeval)
  Using cached nltk-3.9.1-py3-none-any.whl.metadata (2.9 kB)
Collecting pandas==2.1.4 (from fmeval)
  Using cached pandas-2.1.4.tar.gz (4.3 MB)
  Installing build dependencies ... done
  Getting requirements to build wheel ... done
  Installing backend dependencies ... done
  Preparing metadata (pyproject.toml) ... error
  error: subprocess-exited-with-error

  × Preparing metadata (pyproject.toml) did not run successfully.
  │ exit code: 1
  ╰─> [87 lines of output]
      + meson setup /private/var/folders/h8/6nd87j491lq207z1qntz_wjw0000gr/T/pip-install-grk6oykh/pandas_276017e43c4f49a7add11cb796cc4282 /private/var/folders/h8/6nd87j491lq207z1qntz_
      The Meson build system
      Version: 1.2.1
      Source dir: /private/var/folders/h8/6nd87j491lq207z1qntz_wjw0000gr/T/pip-install-grk6oykh/pandas_276017e43c4f49a7add11cb796cc4282
      Build dir: /private/var/folders/h8/6nd87j491lq207z1qntz_wjw0000gr/T/pip-install-grk6oykh/pandas_276017e43c4f49a7add11cb796cc4282/.mesonpy-qev8_03b/build
      Build type: native build
      Project name: pandas
      Project version: 2.1.4
      C compiler for the host machine: cc (clang 16.0.0 "Apple clang version 16.0.0 (clang-1600.0.26.6)")
      C linker for the host machine: cc ld64 1115.7.3
      C++ compiler for the host machine: c++ (clang 16.0.0 "Apple clang version 16.0.0 (clang-1600.0.26.6)")
      C++ linker for the host machine: c++ ld64 1115.7.3
      Cython compiler for the host machine: cython (cython 0.29.37)
      Host machine cpu family: aarch64
      Host machine cpu: aarch64
      Program python found: YES (/private/tmp/fmeval-test/.venv/bin/python3)
      Found pkg-config: /opt/homebrew/bin/pkg-config (2.3.0)
      Run-time dependency python found: YES 3.13
      Build targets in project: 53

      pandas 2.1.4

        User defined options
          Native files: /private/var/folders/h8/6nd87j491lq207z1qntz_wjw0000gr/T/pip-install-grk6oykh/pandas_276017e43c4f49a7add11cb796cc4282/.mesonpy-qev8_03b/build/meson-python-nati
          buildtype   : release
          vsenv       : True
          b_ndebug    : if-release
          b_vscrt     : md

      Found ninja-1.11.1.git.kitware.jobserver-1 at /private/var/folders/h8/6nd87j491lq207z1qntz_wjw0000gr/T/pip-build-env-9rnaxq9_/normal/bin/ninja

      Visual Studio environment is needed to run Ninja. It is recommended to use Meson wrapper:
      /private/var/folders/h8/6nd87j491lq207z1qntz_wjw0000gr/T/pip-build-env-9rnaxq9_/overlay/bin/meson compile -C .
      + /private/var/folders/h8/6nd87j491lq207z1qntz_wjw0000gr/T/pip-build-env-9rnaxq9_/normal/bin/ninja
      [1/151] Generating pandas/_libs/algos_common_helper_pxi with a custom command
      [2/151] Generating pandas/_libs/khash_primitive_helper_pxi with a custom command
      [3/151] Generating pandas/_libs/algos_take_helper_pxi with a custom command
      [4/151] Generating pandas/_libs/index_class_helper_pxi with a custom command
      [5/151] Generating pandas/_libs/sparse_op_helper_pxi with a custom command
      [6/151] Generating pandas/_libs/intervaltree_helper_pxi with a custom command
      [7/151] Generating pandas/_libs/hashtable_class_helper_pxi with a custom command
      [8/151] Generating pandas/_libs/hashtable_func_helper_pxi with a custom command
      [9/151] Generating pandas/__init__.py with a custom command
      [10/151] Compiling C object pandas/_libs/tslibs/parsing.cpython-313-darwin.so.p/.._src_parser_tokenizer.c.o
      [11/151] Compiling Cython source /private/var/folders/h8/6nd87j491lq207z1qntz_wjw0000gr/T/pip-install-grk6oykh/pandas_276017e43c4f49a7add11cb796cc4282/pandas/_libs/tslibs/base.p
      [12/151] Compiling C object pandas/_libs/tslibs/base.cpython-313-darwin.so.p/meson-generated_pandas__libs_tslibs_base.pyx.c.o
      FAILED: pandas/_libs/tslibs/base.cpython-313-darwin.so.p/meson-generated_pandas__libs_tslibs_base.pyx.c.o
      cc -Ipandas/_libs/tslibs/base.cpython-313-darwin.so.p -Ipandas/_libs/tslibs -I../../pandas/_libs/tslibs -I../../../../pip-build-env-9rnaxq9_/overlay/lib/python3.13/site-packages
      pandas/_libs/tslibs/base.cpython-313-darwin.so.p/pandas/_libs/tslibs/base.pyx.c:5399:70: error: too few arguments to function call, expected 6, have 5
       5397 |                 int ret = _PyLong_AsByteArray((PyLongObject *)v,
            |                           ~~~~~~~~~~~~~~~~~~~
       5398 |                                               bytes, sizeof(val),
       5399 |                                               is_little, !is_unsigned);
            |                                                                      ^
      /Users/amrsaber/.pyenv/versions/3.13.1/include/python3.13/cpython/longobject.h:111:17: note: '_PyLong_AsByteArray' declared here
        111 | PyAPI_FUNC(int) _PyLong_AsByteArray(PyLongObject* v,
            |                 ^                   ~~~~~~~~~~~~~~~~
        112 |     unsigned char* bytes, size_t n,
            |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        113 |     int little_endian, int is_signed, int with_exceptions);
            |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
      pandas/_libs/tslibs/base.cpython-313-darwin.so.p/pandas/_libs/tslibs/base.pyx.c:5633:70: error: too few arguments to function call, expected 6, have 5
       5631 |                 int ret = _PyLong_AsByteArray((PyLongObject *)v,
            |                           ~~~~~~~~~~~~~~~~~~~
       5632 |                                               bytes, sizeof(val),
       5633 |                                               is_little, !is_unsigned);
            |                                                                      ^
      /Users/amrsaber/.pyenv/versions/3.13.1/include/python3.13/cpython/longobject.h:111:17: note: '_PyLong_AsByteArray' declared here
        111 | PyAPI_FUNC(int) _PyLong_AsByteArray(PyLongObject* v,
            |                 ^                   ~~~~~~~~~~~~~~~~
        112 |     unsigned char* bytes, size_t n,
            |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
        113 |     int little_endian, int is_signed, int with_exceptions);
            |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
      2 errors generated.
      [13/151] Compiling Cython source /private/var/folders/h8/6nd87j491lq207z1qntz_wjw0000gr/T/pip-install-grk6oykh/pandas_276017e43c4f49a7add11cb796cc4282/pandas/_libs/tslibs/ccalendar.pyx
      [14/151] Compiling Cython source /private/var/folders/h8/6nd87j491lq207z1qntz_wjw0000gr/T/pip-install-grk6oykh/pandas_276017e43c4f49a7add11cb796cc4282/pandas/_libs/tslibs/dtypes.pyx
      [15/151] Compiling Cython source /private/var/folders/h8/6nd87j491lq207z1qntz_wjw0000gr/T/pip-install-grk6oykh/pandas_276017e43c4f49a7add11cb796cc4282/pandas/_libs/tslibs/np_datetime.pyx
      [16/151] Compiling Cython source /private/var/folders/h8/6nd87j491lq207z1qntz_wjw0000gr/T/pip-install-grk6oykh/pandas_276017e43c4f49a7add11cb796cc4282/pandas/_libs/tslibs/nattype.pyx
      [17/151] Compiling Cython source /private/var/folders/h8/6nd87j491lq207z1qntz_wjw0000gr/T/pip-install-grk6oykh/pandas_276017e43c4f49a7add11cb796cc4282/pandas/_libs/tslibs/fields.pyx
      [18/151] Compiling Cython source /private/var/folders/h8/6nd87j491lq207z1qntz_wjw0000gr/T/pip-install-grk6oykh/pandas_276017e43c4f49a7add11cb796cc4282/pandas/_libs/tslibs/conversion.pyx
      [19/151] Compiling Cython source /private/var/folders/h8/6nd87j491lq207z1qntz_wjw0000gr/T/pip-install-grk6oykh/pandas_276017e43c4f49a7add11cb796cc4282/pandas/_libs/tslibs/strptime.pyx
      [20/151] Compiling Cython source /private/var/folders/h8/6nd87j491lq207z1qntz_wjw0000gr/T/pip-install-grk6oykh/pandas_276017e43c4f49a7add11cb796cc4282/pandas/_libs/tslibs/offsets.pyx
      [21/151] Compiling Cython source /private/var/folders/h8/6nd87j491lq207z1qntz_wjw0000gr/T/pip-install-grk6oykh/pandas_276017e43c4f49a7add11cb796cc4282/pandas/_libs/tslibs/parsing.pyx
      [22/151] Compiling Cython source /private/var/folders/h8/6nd87j491lq207z1qntz_wjw0000gr/T/pip-install-grk6oykh/pandas_276017e43c4f49a7add11cb796cc4282/pandas/_libs/tslibs/period.pyx
      [23/151] Compiling Cython source /private/var/folders/h8/6nd87j491lq207z1qntz_wjw0000gr/T/pip-install-grk6oykh/pandas_276017e43c4f49a7add11cb796cc4282/pandas/_libs/tslibs/timedeltas.pyx
      ninja: build stopped: subcommand failed.
      [end of output]

  note: This error originates from a subprocess, and is likely not a problem with pip.
error: metadata-generation-failed

× Encountered error while generating package metadata.
╰─> See above for output.

note: This is an issue with the package mentioned above, not pip.
hint: See above for details.

I am using python version 3.13.1 on MacOS 15.2.


I tried running it with python 3.10 (since readme says fmeval is developed using 3.10) and it works. It also works with python 3.11

This took me some time to figure out, so maybe we can document that the library only works with specific versions of python until underlying problems are fixed?

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