Thanks to visit codestin.com
Credit goes to github.com

Skip to content

Running the hmmsearch #79

@SergeyBaikal

Description

@SergeyBaikal

Dear authors, I find it difficult to run the program without knowing python. How can I run a similar command with the pyhmmer and extract only the best bit score? Could you please help me?

hmmsearch --tblout /home/Results_vog.txt -E 1e-5 --notextw --cpu 8 /home/Vog_219.hmm /home/proteins.fasta

Results_vog.txt > one_target_best_bit_score.tsv

Metadata

Metadata

Assignees

No one assigned

    Labels

    questionFurther information is requested

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions