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A collection of various notebook extensions for Jupyter

JavaScript 5,287 803 Updated Jul 4, 2024

Encoding MS/MS spectra using formula transformers for inferring molecular properties

Jupyter Notebook 68 15 Updated Jun 5, 2024

Python library for processing (tandem) mass spectrometry data and for computing spectral similarities.

Python 234 76 Updated Nov 12, 2025

Spatial alignment of single cell transcriptomic data.

Jupyter Notebook 336 62 Updated Jul 1, 2025

Neural networks for microbe-metabolite interaction analysis

Python 125 52 Updated Nov 4, 2022