# qiime_config
# WARNING: DO NOT EDIT OR DELETE Qiime/qiime_config
# To overwrite defaults, copy this file to $HOME/.qiime_config or a full path
# specified by $QIIME_CONFIG_FP and edit that copy of the file.

cluster_jobs_fp	/software/qiime-1.4.0-release/bin/start_parallel_jobs_ec2.py
python_exe_fp	/software/python-2.6.4-release/bin/python
working_dir	/mnt/share/
blastmat_dir	/software/blast-2.2.22-release/data
blastall_fp	/software/blast-2.2.22-release/bin/blastall	
pynast_template_alignment_fp	/software/core_set_aligned.fasta.imputed
pynast_template_alignment_blastdb	
template_alignment_lanemask_fp	/software/lanemask_in_1s_and_0s
jobs_to_start	4
seconds_to_sleep	60
qiime_scripts_dir	/software/qiime-1.4.0-release/bin
temp_dir	/tmp/
denoiser_min_per_core	50
cloud_environment	True
topiaryexplorer_project_dir
torque_queue	friendlyq
assign_taxonomy_reference_seqs_fp	/software/gg_otus_4feb2011/rep_set/gg_97_otus_4feb2011.fasta
assign_taxonomy_id_to_taxonomy_fp	/software/gg_otus_4feb2011/taxonomies/greengenes_tax_rdp_train.txt
