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Commits on Sep 14, 2022

• Update the cdk-build-util dependency.

  johnmay

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• Update stylesheet for Java 17

  johnmay

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• Move cdk-test main/ classes to test/ and make the test-jar the dependency.

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Commits on Sep 13, 2022

• CDK v2.8 Release

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Commits on Sep 12, 2022

• Merge pull request #828 from cdk/patch/hose-codes

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  johnmay

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• Cleanup code smells.

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• Bug highlighted by SonarCloud

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• Revert "Tests fixed - but we probably need to deprecate and remove this descriptor unless we can regenerate the DBs."

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• More tweaks needed to be fully match the old legacy behaviour.

  johnmay

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• Move all existing usages of HOSE codes to LEGACY_MODE.

  johnmay

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• Add a flag to switch between LEGACY and DEFAULT (correct) mode.

  johnmay

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• Junit5

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• Simplify sorting logic - we don't need the stringscore, these looks to be a hack to try and fix the nesting issue and can't work since the parents may be idential. Now we have a proper comparator w…

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• Less varriable masking.

  johnmay

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• SonarCloud bug complaint.

  johnmay

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• Tests fixed - but we probably need to deprecate and remove this descriptor unless we can regenerate the DBs.

  johnmay

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• Compare the parent node then the current sphere - fixes #588. Comparator chaining here is a little harder to read so we do it the old-fassioned way. Another test need updating but we can see the ex…

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• More tidying up - the sort in these two places does nothing since it only compares the "stringScore"

  johnmay

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• Identical but simpler logic, use JDK sort and compartor, avoid redundant loop variable.

  johnmay

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• Merge pull request #907 from cdk/junit4-final-removals

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• Need to update the main branch in workflows.

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• freehep (graphics) and cmlxom include Junit4 as a compile time dependency.

  johnmay

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• A subtle bug introduced by a SonarCloud suggestion in ModelBuilder. 1/180 is a const expression and int div was probably not intended. Updating to 1.0/180*π was not correct. The intended expression…

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  johnmay

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• Merge pull request #904 from uli-f/bring_back_clonenotsupportedexception

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• re-introduced CloneNotSupportedException to retain compatability for any downstream code that calls AtomContainerManipulator::extractSubstructure(IAtomContainer,int[])

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Commits on Sep 11, 2022

• Final removal of Junit4, these "Suites" are no longer needed and actually led to classes being run twice.

  

  johnmay

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  egonw

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• Some missing test annotations

  

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• These methods don't need to be public, as noted by SonarCloud

  

  johnmay

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• Fix missing test annotation

  

  johnmay

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• Make all the timeouts longer here

  

  johnmay

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• SonarCloud "bugs"

  

  johnmay

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• Remove the vintage engine dependency. All tests fully ported to JUnit5

  

  johnmay

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• Replace SlowTest category annotation with JUnit5 tag

  

  johnmay

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• Increase timeout

  

  johnmay

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• Junit5 parameterized tests - all uses of org.junit.Test updated.

  

  johnmay

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