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Commits on Feb 13, 2020

• PyIR-Plus Refactor

  crowelab

  committed
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Commits on Aug 16, 2019

• Updated the

  tjonesster

  authored
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• Update README.md

  tjonesster

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Commits on Jun 17, 2019

• Merge pull request #8 from crowelab/newDevBranch

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  tjonesster

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  7953e1c

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• fixed the penalty thing on igblast

  tjonesster

  committed
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• kinda fixed kinda used a workaround

  tjonesster

  committed
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• Made it so that all of the arguments that are passed to igblast can be changed in pyir. There is a bug in it right now that will need to be fixed before this can go live.

  tjonesster

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Commits on Jun 16, 2019

• fixed a dumb type in the previous commit

  tjonesster

  committed
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• here are the latest changes

  tjonesster

  committed
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Commits on Jun 12, 2019

• Merge pull request #6 from crowelab/SamuelSchmitz/Executable

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  tjonesster

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Commits on Jun 11, 2019

• Make sure igblastn is executable

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  Samuel Schmitz

  authored and

  Samuel Schmitz

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Commits on May 9, 2019

• perl script final changes

  tjonesster

  committed
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• imgt editing perl script changed ever so slightly -- these changes might not be needed if the naming convention is going go be upheld at IMGT. It looks like they published a new version of the file…

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  tjonesster

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• small changes to the imgt parser script which should make it so that germline gene parsing script does not assume the number of fields in a description

  tjonesster

  committed
  1ee4f6a

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• change the edit imgt script

  tjonesster

  committed
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Commits on May 8, 2019

• Merge pull request #4 from crowelab/SamuelSchmitz/parser_robustness

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  reccej

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• Make the executbale python3

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  Samuel Schmitz

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  Samuel Schmitz

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• Fix regular expression when parsing igblastn output

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  Samuel Schmitz

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  Samuel Schmitz

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Commits on Apr 18, 2019

• Delete _config.yml

  tjonesster

  authored
  672fdee

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• Update .gitignore

  tjonesster

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Commits on Mar 8, 2019

• Merge pull request #2 from crowelab/dockerStuff

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  crowelab

  authored
  96f9c26

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• added docker

  tjonesster

  committed
  9c19925

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• Update README.md

  

  crowelab

  authored
  87ad9c2

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• created a docker file which should take care of the basic installation

  tjonesster

  committed
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Commits on Mar 7, 2019

• Update README.md

  

  crowelab

  authored
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Commits on Mar 6, 2019

• Changed default matches back to 3

  reccej

  committed
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• Reverted igBlast version to 1.6.1

  reccej

  committed
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• Fixed bug in assigning 'Top V gene e_value' and 'Top J gene e_value'.

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  reccej

  committed
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Commits on Feb 21, 2019

• Update README.md

  

  crowelab

  authored
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• Update README.md

  

  crowelab

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• Update README.md

  

  crowelab

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  f53b84e

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• Update README.md

  

  crowelab

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  14fe55b

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• Update README.md

  

  crowelab

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  6826c82

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• Update README.md

  

  crowelab

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• Update README.md

  

  crowelab

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