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Commits on Nov 14, 2024

• build: Try a better Dockerfile

  edmundmiller

  committed
  ceb3326

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• ci: Get clever with singularity flag

  edmundmiller

  committed
  fad1376

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• build: Bump quarto to 24.04

  edmundmiller

  committed
  c1f79b7

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• ci(renovate): Add Dockerfile building

  edmundmiller

  committed
  20b34f0

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• ci(renovate): Managers => Datasources (#6988)

  edmundmiller

  authored
  bc26bc7

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Commits on Nov 13, 2024

• Renovate DRY (#5768)

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  edmundmiller

  authored
  5d776f1

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• ci(renovate): Allow channels in environment.ymls (#5400)

  edmundmiller

  authored
  cd6a81e

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• ci(wave): Get the syntax right (#6986)

  edmundmiller

  authored
  bc6d86f

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• Ignore wave being flakey (#6985)

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  edmundmiller

  authored
  809053d

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• Starting point for differential subworkflow (#6951)

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  pinin4fjords

  and

  nf-core-bot

  authored
  76fc14f

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• chore: bump fgbio version (#6978)

  znorgaard

  authored
  8da5d81

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Commits on Nov 12, 2024

• stub + nf-test (#6971)

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  sateeshperi

  authored
  1e66ca4

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• happy/sompy change -f to -R (#6965)

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  kubranarci

  authored
  52e3827

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• migrate to nf-test (#6970)

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  sateeshperi

  authored
  a15872d

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Commits on Nov 11, 2024

• Add deepsomatic module scaffolding (#6622)

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  4 peopleauthored
  89e06f6

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• Add Coverm contigs module (#6959)

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  prototaxites

  authored
  b4c2b03

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• New module: anndata/getsize module (#6925)

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  LeonHafner

  and

  SPPearce

  authored
  685fbea

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Commits on Nov 8, 2024

• chore(deps): update pre-commit hook astral-sh/ruff-pre-commit to v0.7.3 (#6961)

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  renovate[bot]

  authored
  9c6d802

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• Remove pytest remainings (#6962)

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  LeonHafner

  authored
  5a03dfa

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• Add FCSGX_RUNGX (#6952)

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  mahesh-panchal

  authored
  ca0b47f

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• chore(deps): update tj-actions/changed-files action to v45 (#6958)

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  renovate[bot]

  authored
  f8cba37

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• chore(deps): update github actions (#6957)

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  renovate[bot]

  authored
  b55cf80

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Commits on Nov 7, 2024

• Enable Harshil Alignment (#6956)

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  edmundmiller

  authored
  3f6e7c2

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• ci: Use correct job name (#6955)

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  edmundmiller

  authored
  c964430

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• Skip wave if the PR is from a fork (#6954)

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  edmundmiller

  authored
  6d2697d

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• Add FCSGX_FETCHDB (#6948)

  mahesh-panchal

  authored
  dfe1c9a

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• Add CI to build mulled containers with Wave (#4080)

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  edmundmiller

  and

  ewels

  authored
  669eb24

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• Add hostile/fetch (#6949)

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  3 peopleauthored
  a2db453

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• Tidy up Python script to fetch Singularity HTTPS image URLs (#6945)

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  ewels

  authored
  033f2f2

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• Add metamdbg module (#6885)

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  prototaxites

  and

  SPPearce

  authored
  7c08494

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• Hiphase - new module (#6854)

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  7 peopleauthored
  d29fcb4

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Commits on Nov 6, 2024

• Update quast container (#6943)

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  nschan

  authored
  ed2d77c

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• 5127 new module xenium ranger (#6826)

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  9 peopleauthored
  b5e1891

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Commits on Nov 5, 2024

• remove pre-commit config validator hook (#6940)

  mashehu

  authored
  395b541

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• add anndata/barcodes module (#6911)

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  chaochaowong

  and

  LeonHafner

  authored
  05e4d64

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