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Commits on Sep 16, 2025

• Created using Colab

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Commits on Aug 7, 2025

• Merge pull request #99 from gbouras13/dev

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• Fix #98 add backup download option

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  98c7d20

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• add citation

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  0b22cbe

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• clean repo and docs

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Commits on Aug 6, 2025

• Created using Colab

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• Created using Colab

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• Created using Colab

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• Merge pull request #97 from gbouras13/dev

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• workflow dispatch

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• Merge pull request #96 from gbouras13/dev

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• fix env and CI

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  1fd15ea

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• Merge pull request #95 from gbouras13/dev

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• add some more docs

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  2d6e63f

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• Merge pull request #94 from gbouras13/dev

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• clean up docs

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  f2f71c5

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• Merge pull request #93 from gbouras13/dev

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Commits on Aug 5, 2025

• workflow

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  a9029d8

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• docs/

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  7b1fbee

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• clean

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  ebd9d08

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• fix readme

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  3d34c2e

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• update docs

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  54d9ae1

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• Fix #92 validation

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  e43407d

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• v1.0.0 database installation

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• remove clustered db functionality

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  c497bb3

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• phold run clustered db issue

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  b2d683c

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Commits on Jun 30, 2025

• fix order of clustered db with gpu creation

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  59d356e

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Commits on Jun 29, 2025

• support clustered db searches for benchmarking

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  fef07f8

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Commits on Jun 20, 2025

• remove hyps from compare

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  11128b2

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Commits on Jun 16, 2025

• Fix #89 clean genbank format detection and add support for Bakta style input

  gbouras13

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  593738d

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• add hyps to annotate only pharokka hypotheticals

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  98f6292

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Commits on Apr 18, 2025

• fix prostt5 oom masking

  gbouras13

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  1d88a2a

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• set masking thresh 25

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  72e68ce

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Commits on Apr 15, 2025

• fix masking - make X not lower case

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Commits on Apr 14, 2025

• -a 1 only if structures used

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