-
Notifications
You must be signed in to change notification settings - Fork 15
Open
Description
Hi! I'm running this simple script to visualise bigwig file:
import gosling as gos
data = gos.bigwig(
url=‘https://s3.amazonaws.com/gosling-lang.org/data/ExcitatoryNeurons-insertions_bin100_RIPnorm.bw’,
column= ‘position’,
value=‘peak’
)
track = gos.Track(data).mark_area().encode(
x=gos.X(‘position:G’),
y=gos.Y(“peak:Q”, axis=“right”),
color=gos.value(“royalblue”),
).properties(title=“bigwig”,height=180,width=725)
vis = track.view(title=‘test’)
vis.save(‘test.html’)if instead of your url I saved the file on my Amazon aws and run the same script using this url:
https://enrmil.s3.eu-north-1.amazonaws.com/ExcitatoryNeurons-insertions_bin100_RIPnorm.bw
I obtain an empty track. This is also happening if I use a localhost.
Metadata
Metadata
Assignees
Labels
No labels