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Commits on Oct 31, 2025

• wip: update intro page

  hiyama341

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  c4a75e2

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Commits on Oct 29, 2025

• wip: update genome name file

  hiyama341

  committed
  5a0d629

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• update: link to paper citation

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  a4e90f7

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Commits on Oct 22, 2025

• wip: fixed name of project

  hiyama341

  committed
  ba27f92

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Commits on Oct 9, 2025

• wip: fixed typos

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  2b4c522

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Commits on Oct 6, 2025

• wip: rerun last picture

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  committed
  e500e5e

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• wip: cells run but not pictures

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  348191a

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• wip: no outputs

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  84c98f6

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• wip: smaller outputs to make the file smaller

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  b0571c3

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Commits on Sep 25, 2025

• wip: rerunning notebooks

  hiyama341

  committed
  b46e4e8

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• wip: fixed metadata

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  b72144d

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• wip: cleaned up plasmid map

  hiyama341

  committed
  27143f6

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Commits on Aug 14, 2025

• wip: rerunning the notebooks with their generated files.

  hiyama341

  committed
  d43aed2

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Commits on Aug 13, 2025

• wip: dCas9 genbank

  hiyama341

  committed
  3583398

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• wip: fixed repair template bug for cas3 and cas9

  hiyama341

  committed
  d1e2f17

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Commits on Aug 12, 2025

• wip: increasing number of iterations allowed to find optimal primers

  hiyama341

  committed
  8c6a955

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Commits on Aug 11, 2025

• wip: fixed metadata

  hiyama341

  committed
  20b63c1

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• wip: fixed metadata

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  b77519c

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• wip: added troubleshooting protocol

  hiyama341

  committed
  0fab12e

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• wip: changed flanking region default to 1000

  hiyama341

  committed
  a086906

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• wip: updated CRISPR-best test +- strand test

  hiyama341

  committed
  0d1b9c6

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Commits on Jul 24, 2025

• wip: fixed broken url

  hiyama341

  committed
  e2dd30e

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• wip: fixed typo in the annotation

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  950a2ff

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• wip: fixed url typo

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  ac15d78

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• wip: gRNA scaffold annotations fixed

  hiyama341

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  6018b00

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• wip. Fixed promoter annotation

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  35607f8

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Commits on Jul 23, 2025

• wip: updated url

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  committed
  b67b7c9

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Commits on Jul 22, 2025

• CRISPRi KD of 05956

  hiyama341

  committed
  68b5eca

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• wip: plasmid files from streptocad CRISPRi

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  committed
  ef274c0

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• wip: sequencing files

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  c150d02

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• wip: first ~200 bp

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  1826b19

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• wip: original alignments

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  92edbf3

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• wip: stacked chromatograms

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  27fdbae

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• wip: sanger plots for second validation

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  de089f5

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Commits on Jul 21, 2025

• wip: targeting LLPMBPKK_05956 with streptoCAD

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  committed
  59a5dd3

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