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Commits on Jun 7, 2022

• Update cycif.py

  kbestak

  authored
  3163ebd

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• Merge pull request #1 from kbestak/kbestak-adding-palom-cycif

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  kbestak

  authored
  9a8e2da

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• Add files via upload

  kbestak

  authored
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Commits on Apr 13, 2022

• Rename helper-cycif.py to helper_cycif.py

  kbestak

  authored
  d2a7396

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• Add files via upload

  kbestak

  authored
  63d73a1

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• Add files via upload

  kbestak

  authored
  ee4915d

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• Add files via upload

  kbestak

  authored
  cc450c7

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• Update __init__.py

  kbestak

  authored
  645c9ec

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Commits on Apr 8, 2022

• Update svs.py

  kbestak

  authored
  3e6f449

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Commits on Mar 22, 2022

• Fix incorrect block affine matrix calculation

  Yu-AnChen

  committed
  533a0c6

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Commits on Mar 21, 2022

• Bump version

  Yu-AnChen

  committed
  e45300c

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• Fix brightfield flag checking logic

  Yu-AnChen

  committed
  1c7640f

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Commits on Mar 11, 2022

• Fix typo in readme

  Yu-AnChen

  authored
  08aac04

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• Add comments in tiff usage script in readme

  Yu-AnChen

  authored
  95d60bb

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Commits on Mar 9, 2022

• Pin Zarr version (>=2.10.0, <2.11) until resolve issues in v2.11

  Yu-AnChen

  committed
  d824990

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• Update readme to reflect support of plain tiff

  Yu-AnChen

  committed
  6c64902

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Commits on Mar 4, 2022

• Add option to choose pyramid downscale factor

  Yu-AnChen

  committed
  6be9489

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Commits on Feb 24, 2022

• Update version

  Yu-AnChen

  committed
  2cce34e

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• Do histogram matching as well for image pair of the same type

  Yu-AnChen

  committed
  f294feb

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• Use entropy to detect whether an image is brightfield or fluoroscent

  Yu-AnChen

  committed
  da462a9

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Commits on Feb 23, 2022

• Refactor color base class

  Yu-AnChen

  committed
  74352f7

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• Add support for non-pyramidal and non-tiled tiff

  Yu-AnChen

  committed
  647efb1

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• Add support for single-channel and RGB(A) tiff image

  Yu-AnChen

  committed
  31ac4bd

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• Fix deriving target affine matrix from thumbnail registration

  Yu-AnChen

  committed
  3f99978

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• Open optional blurring and upsampling during block phase correlation

  Yu-AnChen

  committed
  25b787a

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• Switch to `cv2.INTER_AREA` for better downsizing interpolation

  Yu-AnChen

  committed
  59cede3

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Commits on Dec 7, 2021

• Update version

  Yu-AnChen

  committed
  6fb7792

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• Skip alignment if moving img filepath is the same a ref image filepath

  Yu-AnChen

  committed
  b1c5d76

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• Add function to choose a good thumbnail level for coarse alignment

  Yu-AnChen

  committed
  689db85

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Commits on Dec 6, 2021

• Add dab mode to extract dab from hematoxylin-dab stained image

  Yu-AnChen

  committed
  47d238c

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Commits on Dec 3, 2021

• Update palom-logo.svg

  Yu-AnChen

  authored
  782efcd

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Commits on Dec 2, 2021

• Update palom-logo with outlined text

  Yu-AnChen

  authored
  5fc623b

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• Add logo (#4)

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  Yu-AnChen

  authored
  94e1a65

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Commits on Dec 1, 2021

• Update scripting section in readme

  Yu-AnChen

  committed
  6e0171a

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Commits on Nov 30, 2021

• Bump version

  Yu-AnChen

  committed
  14372d8

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