Avatars for Zoom, Skype and other video-conferencing apps.

MATLAB code to calculate the 3D skeleton of a binary volume using parallel medial axis thinning

MATLAB code to derive the network graph of a 3D voxel skeleton

Iris Recognition Algorithms Comparison between Daugman algorithm and Hough transform on Matlab

Image processing matlab algorithms for iris segmentation and identification

plots things that are not boxplots

Graph-based modeling for neuroscience.

Legacy project, now part of https://github.com/morphonets/SNT. Bitmap morphometry of neuronal arbors through Sholl

Analyse OCT files segmented using the iowa reference algorithm

Microscopy Image Browser version 2 is a package for image processing, segmentation and visualization of multi-dimensional (2D-4D) microscopy datasets

A fast 'point(s)-in-polygon' test for MATLAB.

PTVResearch is a state of the art code for particle tracking and particle image velocimetry

TIGRE: Tomographic Iterative GPU-based Reconstruction Toolbox

Matlab toolbox for managing 3D scenes and physically-based rendering.

Matlab toolbox for connectomics analysis and rendering

BoneJ 1.x releases. For up-to-date code see https://github.com/bonej-org/BoneJ2

Neuron Image Analyzer: Automated and Accurate Extraction of Neuronal Data from Low Quality Images

Iso2Mesh - a 3D surface and volumetric mesh generator for MATLAB/Octave

IceImarisConnector is a simple commodity class that eases communication between Bitplane Imaris (http://www.bitplane.com) and MATLAB (http://www.mathworks.com) using the Imaris XT interface (http:/…

M2M is a matlab code to compute volume, surface, thickness from 2 manually traced masks (binary data)

MatConvNet: CNNs for MATLAB

Deep Learning Specialization by Andrew Ng on Coursera.

Functions and scripts for analyzing multielectrode array data collected from tiger salamander and rodent retina.