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Description
Recently, I asked our system admin to install HDF5/1.14.3 by spack, zfp, and H5Z-ZFP manually on our supercomputer. But when I tried h5repack to compress the mesh.h5 in the H5Z-ZFP test. I got errors on all variables in the h5 file as follows:
Before I used h5repack, I export HDF5_PLUGIN_PATH correctly. After I got the errors, I checked that all the libraries were correctly linked. There are more details in the attached log file.
Also if I used the different set of HDF5 from one of my conda environment, but used the same HDF5_PLUGIN_PATH, I can run the h5repack successfully.
Could you please help me to solve the issue? Thanks!
h5repack -i mesh.h5 -o mesh_zfp.h5 -f UD=32013,0,4,1,0,0,1074921472 -v
No all objects to modify layout
All objects to apply filter are...
User Defined 32013
Making new file ...
Type Filter (Compression) Name
group /
HDF5-DIAG: Error detected in HDF5 (1.14.3) thread 0:
#000: /glade/derecho/scratch/csgteam/temp/spack/derecho/23.09/builds/spack-stage-hdf5-1.14.3-ten6adliyyajyc2vyv6vu7xg254bnhls/spack-src/src/H5T.c line 2052 in H5Tget_class(): not a datatype
major: Invalid arguments to routine
minor: Inappropriate type
warning: could not create dataset . Applying original settings
dset /DxDy
HDF5-DIAG: Error detected in HDF5 (1.14.3) thread 0:
#000: /glade/derecho/scratch/csgteam/temp/spack/derecho/23.09/builds/spack-stage-hdf5-1.14.3-ten6adliyyajyc2vyv6vu7xg254bnhls/spack-src/src/H5T.c line 2052 in H5Tget_class(): not a datatype
major: Invalid arguments to routine
minor: Inappropriate type
warning: could not create dataset . Applying original settings
dset /DxDyDz
h5repack-error.txt