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Commits on Nov 16, 2023

• source for simulated FASTQ

  agmcarthur

  committed
  5ef7622

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Commits on Nov 1, 2023

• Merge pull request #254 from hunglin59638/issue-226

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  raphenya

  authored
  e4e092d

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Commits on Oct 27, 2023

• preload output_tab_sequences to dictionary

  hunglin59638

  committed
  17dc039

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Commits on Oct 26, 2023

• resolve the hang problem #226

  hunglin59638

  committed
  e24b6f4

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Commits on Oct 25, 2023

• Merge pull request #251 from hunglin59638/issue-248

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  raphenya

  authored
  778b83d

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• Merge pull request #250 from hunglin59638/PL-1

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  raphenya

  authored
  b8b51e6

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Commits on Oct 24, 2023

• bugfix: df.append is deprecated, replace with pd.concat #248

  hunglin59638

  committed
  1032aa2

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• add dask and jellyfish to conda_env

  hunglin59638

  committed
  ebe25c9

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Commits on Oct 16, 2023

• adds permissions

  raphenya

  committed
  1d850e3

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Commits on Oct 15, 2023

• removes unsupported input

  raphenya

  committed
  65da81d

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Commits on Oct 13, 2023

• adds stale action

  raphenya

  committed
  cd3d99b

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• fixes mutation lists for rrna models

  raphenya

  committed
  52cb4c6

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Commits on Oct 4, 2023

• update citation

  agmcarthur

  committed
  60fdfc2

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• HSP co-ordinates

  agmcarthur

  committed
  b273468

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• BLAST version

  agmcarthur

  committed
  a8e7a9f

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Commits on Sep 21, 2023

• adds new fields to the readme

  raphenya

  committed
  5bd27cd

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• test only on latest os

  raphenya

  committed
  880f1b1

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• adds code to create config file and add badge

  raphenya

  committed
  7e6b730

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• update versions

  raphenya

  committed
  b5fc064

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Commits on Sep 11, 2023

• removes macos and includes other ubuntu versions

  raphenya

  committed
  f51ae3d

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• remove extra build file

  raphenya

  committed
  b757212

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• testing with ubuntu version 20.04

  raphenya

  committed
  d2ef7ee

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• adding more python versions for testing

  raphenya

  committed
  0c675b4

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• adding missing imports

  raphenya

  committed
  40801b7

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Commits on Sep 8, 2023

• run all tests with blast version 2.14.1

  raphenya

  committed
  39bc9b7

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• test blast version 2.14.1

  raphenya

  committed
  bd5a3ad

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• use load command

  raphenya

  committed
  d6951de

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• run one test

  raphenya

  committed
  a68459c

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• adds back bamtools and suppress logs

  raphenya

  committed
  5dedd83

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Commits on Sep 7, 2023

• use rgi auto load

  raphenya

  committed
  f7322c7

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• update commands

  raphenya

  committed
  dd4d859

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• moved imports for bio

  raphenya

  committed
  1fa17c5

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• moves import

  raphenya

  committed
  734d5b5

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• try using setup to install

  raphenya

  committed
  4f55f62

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• adds setuptools

  raphenya

  committed
  239a5a8

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