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For data like:
AY457915\tBacteria(100);Firmicutes(99);Clostridiales(99);Johnsonella_et_rel.(99);Johnsonella_et_rel.(99);Johnsonella_et_rel.(91);Eubacterium_eligens_et_rel.(89);Lachnospira_pectinoschiza(80);
AY457914\tBacteria(100);Firmicutes(100);Clostridiales(100);Johnsonella_et_rel.(100);Johnsonella_et_rel.(100);Johnsonella_et_rel.(95);Eubacterium_eligens_et_rel.(92);Eubacterium_eligens(84);Eubacterium_eligens(81);
AY457913\tBacteria(100);Firmicutes(100);Clostridiales(100);Johnsonella_et_rel.(100);Johnsonella_et_rel.(100);Roseoburia_et_rel.(97);Roseoburia_et_rel.(97);Eubacterium_ramulus_et_rel.(90);uncultured(90);
AY457912\tBacteria(100);Firmicutes(99);Clostridiales(99);Johnsonella_et_rel.(99);Johnsonella_et_rel.(99);
AY457911\tBacteria(100);Firmicutes(99);Clostridiales(98);Ruminococcus_et_rel.(96);Anaerofilum-Faecalibacterium(92);Faecalibacterium(92);Faecalibacterium_prausnitzii(90);
I get results like:
> result$data$class_data
# A tibble: 38 x 3
name score taxon_id
* <chr> <chr> <chr>
1 Bacteria 100 b
2 Firmicutes 99 c
3 Clostridiales 99 d
4 Johnsonella_et_rel. 99 e
5 Johnsonella_et_rel. 99 g
6 Johnsonella_et_rel. 91 i
7 Eubacterium_eligens_et_rel. 89 l
8 Lachnospira_pectinoschiza 80 o
9 Bacteria 100 b
10 Firmicutes 100 c
# ... with 28 more rows
An input_index column would be useful to group rows.
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