rna
The LinearDesign mRNA design software.
Improving RNA structure prediction through multitask learning on diverse crowdsourced data.
Repository for mRNA Paper and CodonBERT publication.
Python Implementation of Codon Adaption Index
Python utility to estimate, compare, and reweight RNA energetics across many secondary structure algorithms.
Source code for RNA-FrameFlow: SE(3) Flow Matching for 3D RNA Backbone Design
Draw RNA secondary structures in python.
The new source code of the LinearFold, linear-time prediction for RNA secondary structures
Python library for array programming on biological datasets. Documentation available at: https://bionumpy.github.io/bionumpy/
Genome modeling and design across all domains of life
RiboNN: predicting translation efficiencies from mRNA sequences