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reps

8 repositories

Foundation Models for Genomics & Transcriptomics

Jupyter Notebook 720 76 Updated Jul 10, 2025

Multi-Layer Network Model leverages identification of spatial domains from spatial transcriptomics data

Jupyter Notebook 12 1 Updated Aug 25, 2024

High dimensional weighted gene co-expression network analysis

R 441 46 Updated Oct 23, 2025

Genetic Algorithm for Metabolic Optimization

MATLAB 4 1 Updated Mar 17, 2022

Collection of fragmentomic analysis scripts

R 12 3 Updated Jul 3, 2024

An interactive explorer for single-cell transcriptomics data

JavaScript 721 143 Updated Oct 12, 2025

Hone computational biology skills by re-enacting Figure 1 of modern biology papers

Jupyter Notebook 262 55 Updated Jul 25, 2024