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Commits on Nov 15, 2025

• Fix AFDB-based templates being rejected because of uppercase _chem_comp.type

  milot-mirdita

  committed
  92d6e9c

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Commits on Oct 23, 2025

• Update setup.py

  sokrypton

  authored
  3bfc95c

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• Update mapping.py

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  sokrypton

  committed
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Commits on Aug 26, 2025

• Update version to 2.3.10

  milot-mirdita

  committed
  8aefecd

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• Prepare for jax 0.6

  milot-mirdita

  committed
  aab4e12

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Commits on Jul 27, 2025

• Update version to 2.3.9

  martin-steinegger

  authored
  30ba257

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• Merge pull request #8 from Poko18/initial_guess

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  martin-steinegger

  authored
  1b7edfb

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Commits on May 11, 2025

• Merge branch 'main' into initial_guess

  Poko18

  authored
  74f8afb

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Commits on Mar 18, 2025

• v2.3.8

  milot-mirdita

  committed
  a8c3637

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• Update pypi action to v1.12.4

  milot-mirdita

  committed
  6315ac7

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• Fix openmm tolerance unit definition

  milot-mirdita

  committed
  225324e

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• Fix numpy 2 issue with np.string_

  milot-mirdita

  committed
  c87d50c

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Commits on Dec 4, 2024

• Actifptm (#10)

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  gezmi

  and

  jvarga

  authored
  0f3dce2

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Commits on Mar 19, 2024

• Merge pull request #1 from Poko18/mmcifparsing

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  Poko18

  authored
  0dca0e9

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• Update AlphaFold version in metadata

  Poko18

  committed
  c0cb628

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Commits on Mar 18, 2024

• Add saving Protein to mmCIF file and reading Protein from mmCIF (from AF2 repo - 6c4d833fbd1c6b8e7c9a21dae5d4ada2ce777e10)

  Poko18

  committed
  ce488f4

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• Refactor model.py: Add initial guess for all_atom_positions

  Poko18

  committed
  db62343

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Commits on Dec 28, 2023

• v2.3.6 - Fix BioPython deprecated SCOPData import & Fix NaN

  milot-mirdita

  committed
  9c3ec6e

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Commits on Nov 13, 2023

• Remove dependency in setup.py to docker and tensorflow-cpu

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  milot-mirdita

  committed
  2febbbd

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• Fix NaNs in jax > 0.4

  milot-mirdita

  committed
  ffbf87b

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Commits on Apr 29, 2023

• Update OpenMM imports to work with new OpenMM API

  milot-mirdita

  committed
  7386194

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Commits on Feb 18, 2023

• v2.3.4 - fix memory leaks (attempt 2) (#6)

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  sokrypton

  authored
  41807ea

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Commits on Feb 14, 2023

• v2.3.3 - fixing memory leaks

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  sokrypton

  authored
  8f50ccb

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Commits on Feb 11, 2023

• v2.3.2

  sokrypton

  authored
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Commits on Feb 10, 2023

• allow for no batch inputs

  sokrypton

  committed
  cf096a6

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• Update modules.py

  sokrypton

  authored
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Commits on Feb 7, 2023

• Update model.py

  sokrypton

  committed
  627a7e9

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• keep raw outputs

  sokrypton

  committed
  5b00c00

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• moving key splitting to model.py

  sokrypton

  committed
  80092dc

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Commits on Feb 3, 2023

• Merge pull request #3 from sokrypton/main

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  martin-steinegger

  authored
  15eb3e0

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• Update modules.py

  sokrypton

  committed
  36c5925

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Commits on Feb 2, 2023

• adding iptm support for ptm models

  sokrypton

  committed
  bebd0e2

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• adding mask to ptm/iptm calculation

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  sokrypton

  committed
  96a3a2b

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Commits on Feb 1, 2023

• speedup

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  sokrypton

  authored
  4f00a9b

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• speedup

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  sokrypton

  committed
  83b076e

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