Thanks to visit codestin.com
Credit goes to github.com

Skip to content

AttributeError: module 'data_tools' has no attribute 'structure_from_file' #24

@songxh1996

Description

@songxh1996

I tested to run single chromosome structure script.

fig1.py:
import data_tools
import plotting
structure = data_tools.structure_from_file("outhic_1_500kb_structure.tsv")
plotting.plot_structure_interactive(structure, color=(0,0.5,0.7), radius=0.01)

(miniMDS) [xh@mu01 bed]$ python3 fig1.py

Traceback (most recent call last):
File "/pub3/Liu-group/songxh/hi_c/ld/minimds/bed/fig1.py", line 3, in
structure = data_tools.structure_from_file("outhic_1_500kb_structure.tsv")
AttributeError: module 'data_tools' has no attribute 'structure_from_file'

if you have some ideas, please.

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Type

    No type

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions