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Commits on Mar 26, 2025

• Add DREP/COMAPRE (#8084)

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  jfy133

  authored
  6261997

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• Update mapAD (#7974)

  jch-13

  authored
  e21f9ea

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• Added deepcell/mesmer stub (#8105)

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  kbestak

  authored
  b3aa568

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• Module for plink2 indep_pairwise (#8082)

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  3 peopleauthored
  1df414d

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• Updated tabix modules to latest version (#8103)

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  saramonzon

  authored
  118a005

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• add module spkeeplongestisoform - Fix #7892 (#8079)

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  Juke34

  and

  maxulysse

  authored
  4b3afb5

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• Migrate `ENTREZDIRECT_ESEARCH` to nf-test (#8098)

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  LouisLeNezet

  and

  SPPearce

  authored
  86e6926

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• Add wget module (#8097)

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  itrujnara

  and

  LouisLeNezet

  authored
  5f3bfac

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• Remove environment.yml from imc2mc (#8077)

  SPPearce

  authored
  d2334a6

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• Migrate `expansionhunterdenovo/merge` to nf-test (#8100)

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  LouisLeNezet

  authored
  af77f37

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• Migrate `DUPHOLD` to nf-test (#8080)

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  LouisLeNezet

  authored
  21091da

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• ultra/pipeline nf-test conversion (#7959)

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  SPPearce

  and

  awgymer

  authored
  ccb20c5

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• Added ilastik/pixelclassification nf-test (#7810)

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  kbestak

  authored
  ac6790d

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• new podule plink2/het (#8081)

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  RuthEberhardt

  authored
  d4c48c7

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• Migrate `entrezdirect_xtract` to nf-test (#8096)

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  LouisLeNezet

  authored
  c509557

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• Migrate `ENDORSPY` to nf-test (#8095)

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  LouisLeNezet

  authored
  97e1635

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• Migrate `BIOHANSEL` to nf-test (#7964)

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  LouisLeNezet

  and

  sateeshperi

  authored
  c61284f

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• [New module] Infernal cmsearch (#8026)

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  prototaxites

  and

  famosab

  authored
  7a7c0a0

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• Migrate `DEEPTMHMM` to nf-test (#8067)

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  3 peopleauthored
  c09a102

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• Migrate `EIGENSTRATSNPCOVERAGE` to nf-test (#8088)

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  LouisLeNezet

  and

  SPPearce

  authored
  7cc4017

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• Add new module samtools/bedcov (#8093)

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  ToonRosseel

  and

  nvnieuwk

  authored
  5155eda

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• Migrate `ELPREP_MERGE` to nf-test (#8092)

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  LouisLeNezet

  authored
  df924db

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• update peddy with possibility to feed in a sites file (#7955)

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  rannick

  and

  fellen31

  authored
  e1c5e2e

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• Plink2vcf2bgen module (#8009)

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  edg1983

  authored
  565c264

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• Updated unicycler module to latest version (#8064)

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  saramonzon

  authored
  0335715

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• Migrate `CANU` to nf-test (#7982)

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  LouisLeNezet

  and

  LouisLeNezet

  authored
  679fd1f

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• Migrate `COOLER_ZOOMIFY` to nf-test (#8047)

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  4 peopleauthored
  93d9a83

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• Unify busco configs (#8012)

  mahesh-panchal

  authored
  34ad4b8

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• Unify Art illumina configs (#8046)

  mahesh-panchal

  authored
  189f694

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• Migrated pytest to nf-test for `plink/recode` module. (#8054)

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  mantisps

  authored
  6e2666a

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• Migrate `COOLER_BALANCE` to nf-test (#8030)

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  3 peopleauthored
  62ca07d

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• Migrate `COOLER_CLOAD` to nf-test (#8038)

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  LouisLeNezet

  and

  SPPearce

  authored
  aaf8fb1

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• Update vcflib (#8039)

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  saramonzon

  authored
  8c5e55f

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• Swap muscle to nf-test (#7965)

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  SPPearce

  and

  awgymer

  authored
  1e8b652

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• Update to nf-test (#8074)

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  NishantInfoBytes

  and

  sateeshperi

  authored
  60156e8

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