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Commits on May 25, 2025

• added outputwriter and threadpool

  walaj

  committed
  4edce7e

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• overhaul to concurrency. Simplifying options

  walaj

  committed
  0b515fa

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Commits on Mar 12, 2025

• updated Dockerfile

  walaj

  committed
  b299262

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Commits on Nov 19, 2024

• Merge pull request #142 from francois-a/master

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  walaj

  authored
  928b9bd

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Commits on Oct 23, 2024

• Add missing include <cstdint>

  francois-a

  committed
  d3e00ca

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Commits on May 24, 2024

• fix bug in vcf causing issue with scatter gather bps format

  walaj

  authored
  ab39e3f

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Commits on May 18, 2024

• header issue for scatter/gather fixed

  

  Wala

  committed
  63ffa29

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• point to fixed SeqLib

  

  Wala

  committed
  76adeed

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Commits on May 6, 2024

• added back missing sample id header in tovcf module

  walaj

  committed
  fcfa17e

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Commits on May 5, 2024

• pointing to updated SeqLib with segfault fix

  walaj

  committed
  b60423e

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Commits on Mar 25, 2024

• added heavier debugging

  walaj

  committed
  859b9a5

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• compiler bug

  walaj

  committed
  20b6da2

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Commits on Mar 22, 2024

• added tovcf module

  walaj

  committed
  d9f37db

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Commits on Mar 6, 2024

• updated build for mac

  walaj

  committed
  ebf639e

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• updating SeqLib for mac build

  walaj

  committed
  eb32ca8

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Commits on Oct 13, 2023

• updated readme

  

  Wala

  committed
  5d6b311

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• removed config.h dependency

  

  Wala

  committed
  a59f894

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Commits on Sep 13, 2023

• removed autotools

  

  Wala

  committed
  4f31ba1

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Commits on Sep 12, 2023

• Revert "deprecated refilter and updated verison number"

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  Wala

  committed
  876f710

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• updated SeqLib with sort capabilities

  

  jwala

  committed
  9193015

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• added alignment sort on contigs, removed qname reject for short insert sizes

  

  jwala

  committed
  1fe3d1f

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Commits on May 15, 2023

• Merge pull request #121 from seedgeorge/patch-1

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  walaj

  authored
  c8e87dd

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• deprecated refilter and updated verison number

  

  jwala

  committed
  cee0b61

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• minor fix for issue #112

  

  jwala

  committed
  6630e9f

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Commits on Apr 13, 2023

• Update Dockerfile

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  seedgeorge

  authored
  d14b114

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Commits on Jun 25, 2022

• Merge pull request #114 from Rapsssito/patch-1

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  walaj

  authored
  e384f5c

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Commits on Jun 23, 2022

• feat: Add Dockerfile

  Rapsssito

  authored
  dbc4ad4

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Commits on Nov 11, 2020

• issue 92 patch

  

  Jeremiah Wala

  committed
  0f60e36

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Commits on Mar 7, 2020

• fix for issue #73

  

  Jeremiah Wala

  committed
  4d7b571

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Commits on Feb 18, 2020

• fixed issue #78 for very long chromosomes

  

  Jeremiah Wala

  committed
  e2c11a9

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Commits on Sep 12, 2019

• fixed parsing bug when no fusions in svaba-annotate

  

  Jeremiah Wala

  committed
  c0fecb6

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Commits on Aug 21, 2019

• fixed sense/anti-sense bug in svaba-annotate

  

  Jeremiah Wala

  committed
  743ed6f

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Commits on Apr 25, 2019

• minor refactoring in plotting, svaba annotate

  walaj

  committed
  a77a3ab

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Commits on Apr 8, 2019

• expanded contig output for all-contigs (#63)

  

  Jeremiah Wala

  committed
  8e53e3c

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Commits on Mar 30, 2019

• svaba-annotate to read gz (#60)

  

  Jeremiah Wala

  committed
  6696d70

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