This program is used to parse psl file which is output of blat for some useful information.

Usage: ./blat-statistics path2output.psl path2ref.fa(database) path2query.fa(query).

blat-statistics first adds two additional coloumns named pid(percent idenity) and score, and then print some statistics at the end of output file. Methods for calculating pid and score are described on Blat FAQ.

Find exes in public directory.

For more information of blat, pls see Blat FAQ and PSL format.