| 46b375f9 |
CHANGES IN VERSION 1.8.01
-------------------------
o Fix error when bedgraph contains duplicated loci.
CHANGES IN VERSION 1.8.0
-------------------------
o No new changes
|
| 4e046432 |
CHANGES IN VERSION 1.6.0
-------------------------
o No new changes
|
| b6be3f37 |
CHANGES IN VERSION 1.4.07
-------------------------
o Fix bug when exporting bsseq objects from methrix objects created using Methyldackel pipeline. Issue: #26
|
| 3f01422c |
CHANGES IN VERSION 1.4.05
-------------------------
o rotate x axis labels by 45 degrees in report
o update `methrix_pca()` screeplot
o added CITATION
CHANGES IN VERSION 1.4.00 (Bioconductor version)
|
| 6802b527 |
-------------------------
|
| f9648ba7 |
o read_bedgraphs() supports bedgraphs files from "Bismark_cov", "MethylDackel", "MethylcTools", "BisSNP", "BSseeker2_CGmap"
o write_bedgraphs() supports output to multiBed and metilene file formats
|
| 477be9e4 |
o write_bigwigs() exports methrix object as bigWigs
|
| 6802b527 |
|
| 047efd7b |
CHANGES IN VERSION 1.2.10
-------------------------
o BSgenome ref build parsing error. Issue: #24
o Show which CpGs are missing when loading bedGraphs. Issue: #22
o Faster HDF5 processing. PR: #21
o include SeqStyle option in Manual write_bedgraphs() function. PE: #20
o added the argument for SeqlevelsStyle and trackline in bedgraph. PR: #19
|
| ccc4e39e |
CHANGES IN VERSION 1.2.06
-------------------------
o Fix BioC warnings.
|
| 18462467 |
CHANGES IN VERSION 1.2.05
-------------------------
o Methrix plot typo fix. Issue: #20
|
| ff56192d |
CHANGES IN VERSION 1.0.05
|
| 6446ea8e |
-------------------------
|
| 43066e84 |
o Bugfixes in methrix report. Issue: #12
|
| 6446ea8e |
o Bugfixes in the coverge_filter function --> the output methrix is now sorted
o Bugfixes in the subset_methrix function --> works on unsorted methrix
|
| 59405c5e |
o Bugfixes in read_bedgraphs function --> when all fields are present, parse_source_idx did not return M and U columns
|
| 6446ea8e |
o Added group option to coverage_filter
o Added prefix option to methrix_report
o Added keep option to snp_removal
o minor changes in plotting functions
|
| ff56192d |
|
| 14830b1d |
CHANGES IN VERSION 0.99.0
-------------------------
|
| a6f65e7b |
o Submission to Bioconductor
|
