@article{Morgan:2009,
author = {Morgan, Martin and Anders, Simon and Lawrence, Michael and Aboyoun, Patrick and Pagès, Hervé and Gentleman, Robert},
title = {{ShortRead: a bioconductor package for input, quality assessment and exploration of high-throughput sequence data}},
volume = {25},
number = {19},
pages = {2607-2608},
year = {2009},
journal = {Bioinformatics}
}
@article{Ralph:2012,
author = {Stadhouders, R and Thongjuea, S and Andrieu-Soler, C and Palstra, RJ and Bryne, JC and De Boer, E and Kockx, C and van der Sloot, A and van den Hout, M and van IJcken, W and Lenhard, B and Grosveld, F and Soler, E},
title = {{Dynamic long-range chromatin interactions control Myb proto-oncogene transcription during erythriod development}},
volume = {31},
number = {},
pages = {986-999},
year = {2012},
journal = {EMBO}
}
@article{Soler:2010,
author = {Soler, Eric and Andrieu-Soler, Charlotte and de Boer, Ernie and Bryne, Jan Christian and Thongjuea, Supat and Stadhouders, Ralph and Palstra, Robert-Jan and Stevens, Mary and Kockx, Christel and van IJcken, Wilfred and Hou, Jun and Steinhoff, Christine and Rijkers, Erikjan and Lenhard, Boris and Grosveld, Frank},
title={{The genome-wide dynamics of the binding of Ldb1 complexes during erythroid differentiation}},
journal = {Genes \& Development},
volume = {24},
number = {3},
pages = {277-289},
year = {2010}
}
@article{Supat:2013,
author = {Thongjuea, S and Stadhouders, R and Grosveld, F and Soler, E and Lenhard, Boris},
title={{r3Cseq-an R package for the discovery of long-range genomic interactions with chromosome conformation capture and next-generation sequencing data}},
journal = {Nucleic Acids Research},
volume = {41},
year = {2013}
}