- Based on:
    3e69f06
    9662c14
    3b7e0ba
    8a158b1
    03618d9

- Added adapter detection for TrimGalore nasa@3b7e0ba
- Added NF_RCP plugin for dp_tools
- Added params.outputDir to nextflow.config paths
- Updated version to 1.0.4 in NF_RCP-F/README.md, Workflow_Documention/README.md

- Based on:
    f15c099
    36e0e69
    b3684a4
    dca4fda
    2a56552

- Changed RUNHSEET_FROM_GLDS to RUNSHEET_FROM_GLDS, updated dp_tools image containers to 1.3.23
- Finished migration to local dp_tools
- RNAseq/Pipeline_GL-DPPD-7101_Versions/GL-DPPD-7101-F.md: Updated readme to reflect change to use adapter primer detection from TrimGalore

nasa#29
- Based on:
    1092e80
    2dd8fce
    11a22f0
    7ba75d0
    4e317f2
    5d35b61
    7d2cc24
    53363e4
    1b6e325
    b5013e9
    574eb79
    fc89c5e
    1500019
    6719218
    35c9823
    af0b716
    cbf6055
    6a0d105
    ee188eb
    a8c65d3

- Changed dge module to DGE_BY_DESEQ2, added test modules
- Removed deprecated conda support files
- Updated ensembl file used for test dataset VV

- Added _GLbulkRNAseq to pipeline document, ercc analysis

default_slurm.config
- Increased big_mem from 8GB to 32GB, added align_mem label

genome.nf:
- BUILD_STAR: Lowered STAR memory from 1 * task memory to 0.8 * task memory
- ALIGN_STAR: Changed memory label from big_mem to align_mem, lowered STAR memory from 1 * task memory to 0.8 * task memory
- COUNT_ALIGNED: Added big_mem memory label

genelab.nf:
- GENERATE_MD5SUMS: Added big_mem memory label
- UPDATE_ISA_TABLES: Added workflow-specific dp_tools folder to input

rseqc.nf:
- SORT_INDEX_BAM: Lowered samtools memory per thread scaling from 1 * task memory to 0.8 * task memory

main.nf:
- Added workflow-specific dp_tools folder to input channels for GENERATE_MD5SUMS, UPDATE_ISA_TABLES

- Incorporated changes from Jonathan's PRs that were not integrated into the main repo (a937a84)
	- TrimGalore! will now use autodetect for adaptor type
	- V&V migrated from dp_tools version 1.1.8 to 1.3.3
	- Fix for sample wise checks reusing same sample
	- Workflow usage files will all follow output directory set by workflow user
- Added '_GLbulkRNAseq' filename suffixes