In this directory you'll find examples for common problems and how to solve them
with paquo. Please be aware that until paquo reaches it's first stable
major release, things are bound to change dramatically. We're trying to keep
the examples up to date with current best practices, but it might be possible
that there's already better ways to do this.
To get started setup a python environment with paquo (follow the docs on how
to install). Change to the examples directory and run:
user@computer:~$ python prepare_resources.pyThis will create a folder images and a folder projects with example data.
These are required for all of the examples to run. Refer to the examples to
quickly learn how to solve a certain problem with paquo. In case your specific
problem does not have an example yet, feel free to open a new issue in paquo's
issue tracker. If you already have a solution for a problem and think it might
have value for others (NOTE: it always does!) feel free to fork the paquo
repository and create a Pull Request adding the new example.
user@computer:~$ python example_project_with_classes.pyNOTE: modifying a project from python while it's opened in QuPath will cause issues. It's best to not access a project from QuPath and Python simultaneously.
If anything is unclear or confusing, open an issue. We're happy to help and always keen on improving the documentation and instructions! 💖