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Commits on Sep 13, 2025

• GenomicAlignments 1.45.4: Use anyNA() instead of S4Vectors:::anyMissing()

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Commits on Sep 12, 2025

• GenomicAlignments 1.45.3: Drop .Call entry point map_query_locs_to_ref_locs

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Commits on Jul 28, 2025

• GenomicAlignments 1.45.2: update updateObject() method for GAlignments objects

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Commits on Jun 20, 2025

• GenomicAlignments 1.45.1: Depends on Seqinfo instead of GenomeInfoDb

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Commits on Apr 15, 2025

• bump x.y.z version to odd y following creation of RELEASE_3_21 branch

  

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  bd1d8cc

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• bump x.y.z version to even y prior to creation of RELEASE_3_21 branch

  

  A Wokaty

  committed
  41db306

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• update NEWS

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Commits on Oct 29, 2024

• bump x.y.z version to odd y following creation of RELEASE_3_20 branch

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• bump x.y.z version to even y prior to creation of RELEASE_3_20 branch

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  committed
  5a82c79

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• update NEWS

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Commits on Apr 30, 2024

• update NEWS

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  eb08522

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• bump x.y.z version to odd y following creation of RELEASE_3_19 branch

  jwokaty

  committed
  f08f80a

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• bump x.y.z version to even y prior to creation of RELEASE_3_19 branch

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  committed
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Commits on Mar 25, 2024

• minor edits + version bump

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  3479ba7

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• Convert WorkingWithAlignedNucleotides from Rnw to Rmd (#22)

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Commits on Feb 13, 2024

• small tweaks to readGAlignments() and readGAlignmentsList()

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• Add 'seqinfo' argument to GAlignments() constructor function

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Commits on Jan 16, 2024

• version bump

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• Bugfix in isCompatibleWithSkippedExons() for single-end read alignments w/ more than 3 junctions (#32)

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Commits on Jan 7, 2024

• oops

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  1cc5bce

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• Fix '\item' tags with empty labels in .Rd files

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  ca0375f

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• List Fedor Bezrukov as contributor and version bump

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  8db5719

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• mapToAlignments S at start 0 coordinate fix (#34)

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Commits on Oct 24, 2023

• bump x.y.z version to odd y following creation of RELEASE_3_18 branch

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  committed
  28c06be

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• bump x.y.z version to even y prior to creation of RELEASE_3_18 branch

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  committed
  3dc8008

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• update NEWS

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Commits on Apr 25, 2023

• bump x.y.z version to odd y following creation of RELEASE_3_17 branch

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• bump x.y.z version to even y prior to creation of RELEASE_3_17 branch

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Commits on Apr 24, 2023

• update NEWS

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Commits on Apr 11, 2023

• Add Robert Castelo as contributor

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  a41c32c

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• Add 'strandMode' argument to readGAlignmentsList() (#26)

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  authored
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Commits on Mar 8, 2023

• Increase 'cigar_buf' size to reduce risk of buffer overflow

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Commits on Nov 1, 2022

• bump x.y.z version to odd y following creation of RELEASE_3_16 branch

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  committed
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• bump x.y.z version to even y prior to creation of RELEASE_3_16 branch

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  committed
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• Set myself as maintainer, update NEWS

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