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JuneHMJuneHM
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‎.gitignore‎

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*_example
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*_ACDC
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*__pycache__
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# *_slices
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# *_volumes
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*_slices
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*_volumes

‎code/DMSPS_trainTest_2d.sh‎

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@@ -30,7 +30,7 @@ CUDA_LAUNCH_BLOCKING=1 CUDA_VISIBLE_DEVICES=0 python train/A_train_weaklySup_SPS
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--model unet_cct --exp A_weakly_SPS_2d --fold stage2 --sup_type pseudoLab --trainData trainReT01.txt
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# test for stage2
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CUDA_LAUNCH_BLOCKING=1 CUDA_VISIBLE_DEVICES=0 python python test/test_2d_forall_fast_txtver.py \
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CUDA_LAUNCH_BLOCKING=1 CUDA_VISIBLE_DEVICES=0 python test/test_2d_forall_fast_txtver.py \
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--data_root_path /mnt/data/HM/Datasets/ACDC2017/ACDC_for2D \
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--model unet_cct --exp A_weakly_SPS_2d --fold stage2
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‎code/test/test_2d_forall_fast_txtver.py‎

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parser.add_argument('--model', type=str,
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default='unet_cct', help='model_name:unet,unet_cct')
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parser.add_argument('--exp', type=str,
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default='A3_weakly_PLS_soft_2d', help='Experiment name')
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default='A_weakly_SPS_soft_2d', help='Experiment name')
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parser.add_argument('--fold', type=str,
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default='stage1', help='fold name')
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parser.add_argument('--num_classes', type=int, default=4,
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help='output channel of network')
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parser.add_argument('--patch_size', type=list, default=[256,256],

‎code/test/test_2d_forall_fast_txtver_forTrainSetUncertaintyOnly_Mean.py‎

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default='unet_cct', help='model_name:unet,unet_cct, etc. the name of pretrained model from stage1')
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parser.add_argument('--exp', type=str,
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default='A3_weakly_PLS_soft_2d', help='experiment_name')
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parser.add_argument('--fold', type=str,
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default='stage1', help='fold name')
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parser.add_argument('--num_classes', type=int, default=4,
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help='output channel of network')
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parser.add_argument('--tt_num', type=int, default=3,

‎code/test/test_3d_forall_fast_txtver.py‎

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default='unet_cct_dropout_3D', help='select model: unet_3D, unet_cct_dropout_3D')
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parser.add_argument('--exp', type=str,
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default='W_weakly_SPS_3d', help='experiment_name')
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parser.add_argument('--fold', type=str,
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default='stage1', help='fold name')
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parser.add_argument('--num_classes', type=int, default=8,
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help='output channel of network')
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parser.add_argument('--tt_num', type=int, default=1,

‎code/test/test_3d_forall_fast_txtver4BraTS.py‎

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parser.add_argument('--exp', type=str,
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default='T3_weakly_SPS_3d', help='experiment_name')
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parser.add_argument('--fold', type=str,
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default='v280_ce_l001_240507', help='fold name')
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default='stage1', help='fold name')
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parser.add_argument('--num_classes', type=int, default=3,
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help='output channel of network')
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parser.add_argument('--tt_num', type=int, default=1,

‎model/Heart_ACDC_Example/A_weakly_SPS_2d_unet_cct_stage1/log/events.out.tfevents.1691236391.x-Super-Server‎ renamed to ‎model/Heart_ACDC_Example/A_weakly_SPS_2d_unet_cct_stage1_1/log/events.out.tfevents.1691236391.x-Super-Server‎

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‎model/Heart_ACDC_Example/A_weakly_SPS_2d_unet_cct_stage1/train_log.txt‎ renamed to ‎model/Heart_ACDC_Example/A_weakly_SPS_2d_unet_cct_stage1_1/train_log.txt‎

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‎model/Heart_ACDC_Example/A_weakly_SPS_2d_unet_cct_stage1/unet_cct_best_model.pth‎ renamed to ‎model/Heart_ACDC_Example/A_weakly_SPS_2d_unet_cct_stage1_1/unet_cct_best_model.pth‎

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‎model/Heart_ACDC_Example/A_weakly_SPS_2d_unet_cct_stage2/log/events.out.tfevents.1695125841.x-Super-Server‎ renamed to ‎model/Heart_ACDC_Example/A_weakly_SPS_2d_unet_cct_stage2_1/log/events.out.tfevents.1695125841.x-Super-Server‎

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