Setup

Platform

setting	value
version	R version 3.3.0 (2016-05-03)
system	x86_64, darwin13.4.0
ui	X11
language	(EN)
collate	en_US.UTF-8
tz	America/Chicago
date	2016-08-11

Packages

package	*	version	date	source
covr		2.2.0	2016-08-04	cran (@2.2.0)
dplyr		0.5.0.9000	2016-07-19	Github (hadley/dplyr@8b28b0b)
gapminder		0.2.0	2015-12-31	CRAN (R 3.3.0)
knitr		1.13	2016-05-09	CRAN (R 3.3.0)
lazyeval		0.2.0.9000	2016-06-17	Github (hadley/lazyeval@c155c3d)
magrittr		1.5	2014-11-22	CRAN (R 3.3.0)
Rcpp		0.12.6	2016-07-19	cran (@0.12.6)
rmarkdown		1.0	2016-07-08	cran (@1.0)
stringi		1.1.1	2016-05-27	cran (@1.1.1)
testthat	*	1.0.2.9000	2016-07-19	Github (hadley/testthat@46d15da)
tibble		1.1-5	2016-08-10	Github (hadley/tibble@dbe66cf)
tidyr		0.5.1.9001	2016-08-11	local (hadley/tidyr@NA)

Check results

90 packages

ARTool (0.10.2)

Maintainer: Matthew Kay [email protected]
Bug reports: https://github.com/mjskay/ARTool/issues/new

0 errors | 0 warnings | 0 notes

bkmr (0.1.0)

Maintainer: Jennifer F. Bobb [email protected]
Bug reports: https://github.com/jenfb/bkmr/issues

0 errors | 0 warnings | 0 notes

blkbox (1.0)

Maintainer: Boris Guennewig [email protected]

0 errors | 0 warnings | 1 note

checking package dependencies ... NOTE
Package suggested but not available for checking: ‘bigrf’

blscrapeR (0.4.2)

Maintainer: Kris Eberwein [email protected]
Bug reports: https://github.com/keberwein/blscrapeR/issues

0 errors | 0 warnings | 0 notes

broom (0.4.1)

Maintainer: David Robinson [email protected]
Bug reports: http://github.com/dgrtwo/broom/issues

0 errors | 0 warnings | 0 notes

carpenter (0.2.0)

Maintainer: Luke Johnston [email protected]
Bug reports: https://github.com/lwjohnst86/carpenter/issues

0 errors | 0 warnings | 0 notes

causaldrf (0.3)

Maintainer: Douglas Galagate [email protected]

0 errors | 0 warnings | 0 notes

cdom (0.1.0)

Maintainer: Philippe Massicotte [email protected]
Bug reports: https://github.com/PMassicotte/cdom/issues

0 errors | 0 warnings | 0 notes

compareDF (1.0.0)

Maintainer: Alex Joseph [email protected]

0 errors | 0 warnings | 0 notes

crawl (2.0.1)

Maintainer: Devin S. Johnson [email protected]

0 errors | 0 warnings | 0 notes

dlstats (0.0.6)

Maintainer: Guangchuang Yu [email protected]
Bug reports: https://github.com/GuangchuangYu/dlstats/issues

0 errors | 0 warnings | 0 notes

easyformatr (0.1.2)

Maintainer: Brandon Taylor [email protected]
Bug reports: https://github.com/bramtayl/easyformatr/issues

0 errors | 0 warnings | 0 notes

edeaR (0.4.2)

Maintainer: Gert Janssenswillen [email protected]

0 errors | 0 warnings | 0 notes

eechidna (0.1)

Maintainer: Ben Marwick [email protected]

0 errors | 0 warnings | 0 notes

eemR (0.1.3)

Maintainer: Philippe Massicotte [email protected]
Bug reports: https://github.com/PMassicotte/eemR/issues

0 errors | 0 warnings | 0 notes

EFDR (0.1.1)

Maintainer: Andrew Zammit-Mangion [email protected]

0 errors | 0 warnings | 1 note

checking R code for possible problems ... NOTE
.gdf : find_loss: no visible global function definition for ‘rnorm’
.p.values : <anonymous>: no visible global function definition for
  ‘pnorm’
.relist.dwt: no visible global function definition for ‘relist’
.relist.dwt: no visible global function definition for ‘as’
.std.wav.coeff : <anonymous>: no visible global function definition for
  ‘mad’
regrid: no visible global function definition for ‘predict’
regrid: no visible global function definition for ‘var’
regrid: no visible global function definition for ‘medpolish’
Undefined global functions or variables:
  as mad medpolish pnorm predict relist rnorm var
Consider adding
  importFrom("methods", "as")
  importFrom("stats", "mad", "medpolish", "pnorm", "predict", "rnorm",
             "var")
  importFrom("utils", "relist")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').

emil (2.2.6)

Maintainer: Christofer Backlin [email protected]
Bug reports: https://github.com/Molmed/emil/issues

0 errors | 0 warnings | 0 notes

engsoccerdata (0.1.5)

Maintainer: James Curley [email protected]

0 errors | 0 warnings | 0 notes

etl (0.3.3)

Maintainer: Ben Baumer [email protected]
Bug reports: https://github.com/beanumber/etl/issues

0 errors | 0 warnings | 0 notes

eurostat (1.2.21)

Maintainer: Lahti Leo [email protected]
Bug reports: https://github.com/ropengov/eurostat/issues

0 errors | 0 warnings | 0 notes

explor (0.2.1)

Maintainer: Julien Barnier [email protected]
Bug reports: https://github.com/juba/explor/issues

0 errors | 0 warnings | 0 notes

eyelinker (0.1)

Maintainer: Simon Barthelme [email protected]

0 errors | 0 warnings | 0 notes

eyetrackingR (0.1.6)

Maintainer: Jacob Dink [email protected]
Bug reports: https://github.com/jwdink/eyetrackingR/issues

0 errors | 0 warnings | 0 notes

ezsummary (0.2.1)

Maintainer: Hao Zhu [email protected]
Bug reports: https://github.com/haozhu233/ezsummary/issues

0 errors | 0 warnings | 0 notes

fuzzr (0.1.0)

Maintainer: Matthew Lincoln [email protected]
Bug reports: https://github.com/mdlincoln/fuzzr/issues

0 errors | 0 warnings | 0 notes

fuzzyjoin (0.1.1)

Maintainer: David Robinson [email protected]

0 errors | 0 warnings | 0 notes

geomnet (0.1.2.1)

Maintainer: Samantha Tyner [email protected]
Bug reports: https://github.com/sctyner/geomnet/issues

0 errors | 0 warnings | 0 notes

geoparser (0.1.0)

Maintainer: Maëlle Salmon [email protected]
Bug reports: http://github.com/ropenscilabs/geoparser/issues

0 errors | 0 warnings | 0 notes

ggfortify (0.2.0)

Maintainer: Masaaki Horikoshi [email protected]

0 errors | 0 warnings | 1 note

checking installed package size ... NOTE
  installed size is  5.3Mb
  sub-directories of 1Mb or more:
    doc   4.9Mb

ggmcmc (1.1)

Maintainer: Xavier Fernández i Marín [email protected]
Bug reports: https://github.com/xfim/ggmcmc/issues

0 errors | 0 warnings | 0 notes

ggRandomForests (2.0.0)

Maintainer: John Ehrlinger [email protected]
Bug reports: https://github.com/ehrlinger/ggRandomForests/issues

0 errors | 0 warnings | 1 note

checking installed package size ... NOTE
  installed size is  5.1Mb
  sub-directories of 1Mb or more:
    data   2.6Mb
    doc    2.1Mb

ggspectra (0.1.8)

Maintainer: Pedro J. Aphalo [email protected]
Bug reports: https://bitbucket.org/aphalo/ggspectra

0 errors | 0 warnings | 0 notes

glycanr (0.3.0)

Maintainer: Ivo Ugrina [email protected]
Bug reports: https://github.com/iugrina/glycanr/issues

2 errors | 0 warnings | 1 note

checking examples ... ERROR
Running examples in ‘glycanr-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: quantilenorm
> ### Title: Quantile Normalization of glycan data
> ### Aliases: quantilenorm
> 
> ### ** Examples
> 
> data(mpiu)
> mpiun <- quantilenorm(mpiu)
Error in quantilenorm(mpiu) : 
  Unable to proceed since package preprocessCore from
        BioConductor is not available on this system. This
        package is a prerequisite to use the quantilenorm function!
Execution halted

checking tests ... ERROR
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
  
  The following objects are masked from 'package:base':
  
      intersect, setdiff, setequal, union
  
  Error in quantilenorm(mpiu, transpose = TRUE) : 
    Unable to proceed since package preprocessCore from
          BioConductor is not available on this system. This
          package is a prerequisite to use the quantilenorm function!
  Calls: test_check ... force -> source_file -> eval -> eval -> quantilenorm
  testthat results ================================================================
  OK: 5 SKIPPED: 0 FAILED: 0
  Execution halted

checking package dependencies ... NOTE
Package suggested but not available for checking: ‘preprocessCore’

googlesheets (0.2.1)

Maintainer: Jennifer Bryan [email protected]
Bug reports: https://github.com/jennybc/googlesheets/issues

0 errors | 0 warnings | 0 notes

gutenbergr (0.1.2)

Maintainer: David Robinson [email protected]
Bug reports: http://github.com/ropenscilabs/gutenbergr/issues

0 errors | 0 warnings | 0 notes

gwdegree (0.1.1)

Maintainer: Michael Levy [email protected]
Bug reports: https://github.com/michaellevy/gwdegree/issues

0 errors | 0 warnings | 0 notes

hdr (0.1)

Maintainer: Eric Persson [email protected]
Bug reports: https://github.com/expersso/hdr

0 errors | 0 warnings | 0 notes

heemod (0.3.3)

Maintainer: Antoine Filipovic-Pierucci [email protected]
Bug reports: https://github.com/pierucci/heemod/issues

0 errors | 0 warnings | 0 notes

highcharter (0.4.0)

Maintainer: Joshua Kunst [email protected]
Bug reports: https://github.com/jbkunst/highcharter/issues

0 errors | 0 warnings | 0 notes

htmltab (0.7.0)

Maintainer: Christian Rubba [email protected]
Bug reports: https://github.com/crubba/htmltab/issues

0 errors | 0 warnings | 0 notes

idbr (0.2)

Maintainer: Kyle Walker [email protected]

0 errors | 0 warnings | 0 notes

IMP (1.1)

Maintainer: Anup Nair [email protected]

0 errors | 0 warnings | 0 notes

IncucyteDRC (0.5.4)

Maintainer: Phil Chapman [email protected]
Bug reports: https://github.com/chapmandu2/IncucyteDRC/issues

0 errors | 0 warnings | 0 notes

JacobiEigen (0.2-2)

Maintainer: Bill Venables [email protected]

0 errors | 0 warnings | 0 notes

lexRankr (0.1.0)

Maintainer: Adam Spannbauer [email protected]

0 errors | 0 warnings | 0 notes

mason (0.2.5)

Maintainer: Luke Johnston [email protected]
Bug reports: https://github.com/lwjohnst86/mason/issues

0 errors | 0 warnings | 0 notes

mixOmics (6.0.0)

Maintainer: Kim-Anh Le Cao [email protected]
Bug reports: [email protected] or https://bitbucket.org/klecao/package-mixomics/issues

0 errors | 0 warnings | 0 notes

mosaic (0.14.4)

Maintainer: Randall Pruim [email protected]
Bug reports: https://github.com/ProjectMOSAIC/mosaic/issues

0 errors | 0 warnings | 1 note

checking installed package size ... NOTE
  installed size is  9.2Mb
  sub-directories of 1Mb or more:
    R     1.8Mb
    doc   6.8Mb

mpoly (1.0.3)

Maintainer: David Kahle [email protected]
Bug reports: https://github.com/dkahle/mpoly/issues

0 errors | 0 warnings | 0 notes

mtconnectR (1.0.1)

Maintainer: Subramanyam Ravishankar [email protected]

0 errors | 0 warnings | 0 notes

NeuralNetTools (1.4.0)

Maintainer: Marcus W. Beck [email protected]
Bug reports: https://github.com/fawda123/NeuralNetTools/issues

0 errors | 0 warnings | 0 notes

nzelect (0.2.0)

Maintainer: Peter Ellis [email protected]

0 errors | 0 warnings | 0 notes

pixiedust (0.7.4)

Maintainer: Benjamin Nutter [email protected]
Bug reports: https://github.com/nutterb/pixiedust/issues

0 errors | 0 warnings | 0 notes

plotly (3.6.0)

Maintainer: Carson Sievert [email protected]
Bug reports: https://github.com/ropensci/plotly/issues

0 errors | 0 warnings | 0 notes

pmc (1.0.2)

Maintainer: Carl Boettiger [email protected]
Bug reports: https://github.com/cboettig/pmc/issues

0 errors | 0 warnings | 0 notes

pollstR (1.4.0)

Maintainer: Jeffrey B. Arnold [email protected]
Bug reports: https://github.com/rOpenGov/pollstR/issues

0 errors | 0 warnings | 0 notes

qdap (2.2.5)

Maintainer: Tyler Rinker [email protected]
Bug reports: http://github.com/trinker/qdap/issues

0 errors | 0 warnings | 0 notes

qualvar (0.1.0)

Maintainer: Joel Gombin [email protected]

0 errors | 0 warnings | 0 notes

R6Frame (0.1.0)

Maintainer: Kristian D. Olsen [email protected]

0 errors | 0 warnings | 0 notes

radarchart (0.2.0)

Maintainer: Doug Ashton [email protected]
Bug reports: https://github.com/mangothecat/radarchart/issues

0 errors | 0 warnings | 0 notes

raw (0.1.2)

Maintainer: Brian A. Fannin [email protected]

0 errors | 0 warnings | 0 notes

RDML (0.9-1)

Maintainer: Konstantin A. Blagodatskikh [email protected]

0 errors | 0 warnings | 0 notes

rfishbase (2.1.1)

Maintainer: Carl Boettiger [email protected]
Bug reports: https://github.com/ropensci/rfishbase/issues

0 errors | 0 warnings | 0 notes

rgho (0.1.0)

Maintainer: Antoine Filipovic-Pierucci [email protected]
Bug reports: https://github.com/pierucci/rgho/issues

0 errors | 0 warnings | 0 notes

RmarineHeatWaves (0.13.1)

Maintainer: Albertus J. Smit [email protected]

0 errors | 0 warnings | 0 notes

RNeXML (2.0.7)

Maintainer: Carl Boettiger [email protected]
Bug reports: https://github.com/ropensci/RNeXML/issues

0 errors | 0 warnings | 1 note

checking package dependencies ... NOTE
Packages suggested but not available for checking: ‘rrdf’ ‘Sxslt’

rnoaa (0.5.6)

Maintainer: Scott Chamberlain [email protected]
Bug reports: http://www.github.com/ropensci/rnoaa/issues

0 errors | 0 warnings | 0 notes

rollply (0.5.0)

Maintainer: Alexandre Genin [email protected]
Bug reports: https://github.com/alexgenin/rollply

0 errors | 0 warnings | 0 notes

ropenaq (0.1.1)

Maintainer: Maëlle Salmon [email protected]
Bug reports: http://github.com/ropenscilabs/ropenaq/issues

1 error | 0 warnings | 0 notes

checking tests ... ERROR
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
    df <- data_frame(x = 1:3, y = list(1,2:3,4))
                                         ^
  tests/testthat/test-unnest.R:49:44: style: Commas should always have a space after.
    df <- data_frame(x = 1:3, y = list(1,2:3,4))
                                             ^
  
  
  testthat results ================================================================
  OK: 1 SKIPPED: 15 FAILED: 1
  1. Failure: Package Style (@tests.R#7) 
  
  Error: testthat unit tests failed
  Execution halted

rpdo (0.2.0)

Maintainer: Joe Thorley [email protected]

0 errors | 0 warnings | 0 notes

rplexos (1.1.4)

Maintainer: Eduardo Ibanez [email protected]
Bug reports: https://github.com/NREL/rplexos/issues

1 error | 1 warning | 0 notes

checking examples ... ERROR
Running examples in ‘rplexos-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: process_folder
> ### Title: Convert PLEXOS files to SQLite databases
> ### Aliases: process_folder process_input process_solution
> 
> ### ** Examples
> 
> # Process the folder with the solution file provided by rplexos
> location <- location_solution_rplexos()
> process_folder(location)
Warning: `rbind_list()` is deprecated. Please use `bind_rows()` instead.
> 
> # Process the folder with the input file provided by rplexos
> location2 <- location_input_rplexos()
> process_folder(location2)
Error in sqliteSendQuery(con, statement, bind.data) : 
  error in statement: no such column: comp_collection
Calls: process_folder ... .local -> sqliteGetQuery -> sqliteSendQuery -> .Call
Execution halted

checking re-building of vignette outputs ... WARNING
Error in re-building vignettes:
  ...
Quitting from lines 186-187 (rplexos.Rmd) 
Error: processing vignette 'rplexos.Rmd' failed with diagnostics:
error in statement: no such column: comp_collection
Execution halted

rprev (0.2.0)

Maintainer: Stuart Lacy [email protected]

0 errors | 0 warnings | 0 notes

rtable (0.1.5)

Maintainer: David Gohel [email protected]
Bug reports: https://github.com/davidgohel/rtable/issues

0 errors | 0 warnings | 0 notes

rtdists (0.6-6)

Maintainer: Henrik Singmann [email protected]
Bug reports: https://github.com/rtdists/rtdists/issues

0 errors | 0 warnings | 0 notes

shazam (0.1.4)

Maintainer: Jason Vander Heiden [email protected]
Bug reports: https://bitbucket.org/kleinstein/shazam/issues

0 errors | 0 warnings | 0 notes

simmer (3.4.1)

Maintainer: Iñaki Ucar [email protected]
Bug reports: https://github.com/r-simmer/simmer/issues

0 errors | 0 warnings | 0 notes

sjmisc (1.8)

Maintainer: Daniel Lüdecke [email protected]

0 errors | 0 warnings | 0 notes

sjPlot (2.0.2)

Maintainer: Daniel Lüdecke [email protected]
Bug reports: https://github.com/sjPlot/devel/issues

0 errors | 0 warnings | 0 notes

statar (0.6.2)

Maintainer: Matthieu Gomez [email protected]
Bug reports: https://github.com/matthieugomez/statar/issues

0 errors | 0 warnings | 0 notes

SWMPr (2.1.5)

Maintainer: Marcus W. Beck [email protected]
Bug reports: https://github.com/fawda123/SWMPr/issues

0 errors | 0 warnings | 0 notes

textreuse (0.1.3)

Maintainer: Lincoln Mullen [email protected]
Bug reports: https://github.com/ropensci/textreuse/issues

0 errors | 0 warnings | 0 notes

tidytext (0.1.1)

Maintainer: Julia Silge [email protected]
Bug reports: http://github.com/juliasilge/tidytext/issues

0 errors | 0 warnings | 0 notes

tigger (0.2.7)

Maintainer: Daniel Gadala-Maria [email protected]
Bug reports: https://bitbucket.org/kleinstein/tigger/issues

0 errors | 1 warning | 0 notes

checking whether package ‘tigger’ can be installed ... WARNING
Found the following significant warnings:
  Warning: replacing previous import ‘alakazam::plot’ by ‘graphics::plot’ when loading ‘tigger’
See ‘/Users/hadley/Documents/tidy-data/tidyr/revdep/checks/tigger.Rcheck/00install.out’ for details.

translateSPSS2R (1.0.0)

Maintainer: Andreas Wygrabek [email protected]
Bug reports: https://github.com/eodaGmbH/translateSPSS2R/issues

0 errors | 0 warnings | 1 note

checking R code for possible problems ... NOTE
applyMetaCheck: no visible global function definition for
  ‘globalVariables’
computeCfvar: no visible global function definition for ‘sd’
computeLag: no visible global function definition for ‘tail’
computeLag: no visible global function definition for ‘head’
computeMedian: no visible global function definition for ‘median’
computeSd: no visible global function definition for ‘sd’
computeVariance: no visible global function definition for ‘var’
enter: no visible global function definition for ‘lm’
... 27 lines ...
Undefined global functions or variables:
  anova as.formula complete.cases cor.test density frequency
  globalVariables head lines lm median na.omit quantile sd summary.lm
  t.test tail title var
Consider adding
  importFrom("graphics", "lines", "title")
  importFrom("stats", "anova", "as.formula", "complete.cases",
             "cor.test", "density", "frequency", "lm", "median",
             "na.omit", "quantile", "sd", "summary.lm", "t.test", "var")
  importFrom("utils", "globalVariables", "head", "tail")
to your NAMESPACE file.

unvotes (0.1.0)

Maintainer: David Robinson [email protected]
Bug reports: http://github.com/dgrtwo/unvotes/issues

0 errors | 0 warnings | 0 notes

vcfR (1.2.0)

Maintainer: Brian J. Knaus [email protected]

0 errors | 0 warnings | 0 notes

VWPre (0.7.0)

Maintainer: Vincent Porretta [email protected]

0 errors | 0 warnings | 0 notes

wordbankr (0.2.0)

Maintainer: Mika Braginsky [email protected]
Bug reports: http://github.com/langcog/wordbankr/issues

0 errors | 0 warnings | 0 notes

wrswoR.benchmark (0.1-1)

Maintainer: Kirill Müller [email protected]
Bug reports: https://github.com/krlmlr/wrswoR.benchmark/issues

0 errors | 0 warnings | 0 notes

wrswoR (1.0-1)

Maintainer: Kirill Müller [email protected]
Bug reports: https://github.com/krlmlr/wrswoR/issues

0 errors | 0 warnings | 0 notes