package examples;

import org.scijava.vecmath.Color3f;

import ij.IJ;

import ij.ImagePlus;

import ij.plugin.PlugIn;

import ij.process.StackConverter;

import ij3d.Content;

import ij3d.Image3DUniverse;

public class Change_Attributes implements PlugIn {

public static void main(String[] args) {

new ij.ImageJ();

IJ.runPlugIn("ij3d.examples.Change_Attributes", "");

}

@Override

public void run(String arg) {

// Open an image

String path = "/home/bene/PhD/brains/template.tif";

ImagePlus imp = IJ.openImage(path);

new StackConverter(imp).convertToGray8();

// Create a universe and show it

Image3DUniverse univ = new Image3DUniverse();

univ.show();

// Add the image as an isosurface

Content c = univ.addMesh(imp);

sleep(5);

// Display the Content in purple

c.setColor(new Color3f(0.5f, 0, 0.5f));

sleep(5);

// Make it transparent

c.setTransparency(0.5f);

sleep(5);

// Change the isovalue (= threshold) of the surface

c.setThreshold(50);

sleep(5);

// remove all contents and close the universe

univ.removeAllContents();

univ.close();

}

private static void sleep(int sec) {

try {

Thread.sleep(sec * 1000);

} catch(InterruptedException e) {

System.out.println(e.getMessage());

}

}

}