t1_measurements
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t1_measurements
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ftiing_t1_data example ====================== Introduction ------------ In this example T1 relaxation data is fit using a series of Python script which use nmrglue to extract and fit the relaxation trajectories. NMRPipe is required to process the data prior to analysis. Instructions ------------ 1. Process the raw time domain data by running the `proc.com` script. This steps requires that NMRPipe be installed. 2. Run extract_trajs.py, which read box limits from boxes.in, a list of spectra from spectra.in and intergrates each peak in each spectrum. The normalized trajecories are stored in the `traj.npy` file. 3. Run fit_exp_leastsq.py to fit the trajectories in the `traj.npy` file. The best fit parameter are stored to the `fits.pickle` file and the human readable `fits.txt` file. 4. Run the pt.py script which creates plots (XYY_plot.png) of the various trajectories.